RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 FAM47DPA6NHR8 397 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 KIAA1324LA8MWY0 1029 aaPredicted RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 A8MX80 341 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 CHURC1-FNTBB4DL54 471 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 E7EVH7 732 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 H0Y858 1186 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 TTI1O43156 1089 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 ZNF821O75541 412 aaPredicted RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 RNASEH2AO75792 299 aaKnown RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 ALDH1A2O94788 518 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 ECEL1O95672 775 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 POP4O95707 220 aaKnown RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 GSRP00390 522 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 SLC4A1P02730 911 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 PRNPP04156 253 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 ITGAVP06756 1048 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 CTSLP07711 333 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 CTAGE8P0CG41 777 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 FAM157BP0CG42 384 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 CTPS1P17812 591 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 GABRG2P18507 467 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 ITIH2P19823 946 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 FSTP19883 344 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 STIP1P31948 543 aaKnown RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 SLC8A1P32418 973 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 CD68P34810 354 aaPredicted RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 RPL22P35268 128 aaKnown RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 TNNT3P45378 269 aaPredicted RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 RPS9P46781 194 aaKnown RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 FNTAP49354 379 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 CCR3P51677 355 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 CLCN5P51795 746 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 EPHB1P54762 984 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 RPS14P62263 151 aaKnown RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 LMNB2Q03252 620 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 TRAF2Q12933 501 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 CAMK2GQ13555 558 aaPredicted RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 SPARCL1Q14515 664 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 PRPSAP1Q14558 356 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 ELAVL3Q14576 367 aaKnown RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 WHAMMP3Q1A5X7 153 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 HSF5Q4G112 596 aaPredicted RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 ZNF776Q68DI1 518 aaPredicted RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 ITPRIPL1Q6GPH6 555 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 OGFOD2Q6N063 350 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 NCEH1Q6PIU2 408 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 GDPD4Q6W3E5 623 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 SYT13Q7L8C5 426 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 BMP8AQ7Z5Y6 402 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 DSG4Q86SJ6 1040 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 CTAGE6Q86UF2 777 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 CTAGE4Q8IX94 777 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 HDDC3Q8N4P3 179 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 SLC25A41Q8N5S1 370 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 TEX26Q8N6G2 289 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 KDM1BQ8NB78 822 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 MNS1Q8NEH6 495 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 SPATA4Q8NEY3 305 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 LPCAT1Q8NF37 534 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 MDGA1Q8NFP4 955 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 IPMKQ8NFU5 416 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 ATL2Q8NHH9 583 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 GRK7Q8WTQ7 553 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 RLN3Q8WXF3 142 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 NKD2Q969F2 451 aaPredicted RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 ISG20Q96AZ6 181 aaKnown RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 CLDN23Q96B33 292 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 ARRDC3Q96B67 414 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 SIPA1Q96FS4 1042 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 IFT43Q96FT9 208 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 ZNF419Q96HQ0 510 aaPredicted RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 TEKT5Q96M29 485 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 NSMCE3Q96MG7 304 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 SPATA13Q96N96 652 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 PSKH2Q96QS6 385 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 NUDCD1Q96RS6 583 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 FAM129BQ96TA1 746 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 OMDQ99983 421 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 APOL2Q9BQE5 337 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 MGME1Q9BQP7 344 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 TRIM51Q9BSJ1 452 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 FICDQ9BVA6 458 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 C1QTNF1Q9BXJ1 281 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 MKRN2Q9H000 416 aaKnown RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 ATP13A3Q9H7F0 1226 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 USP29Q9HBJ7 922 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 CD93Q9NPY3 652 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 ASIC3Q9UHC3 531 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 AMACRQ9UHK6 382 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 SARDHQ9UL12 918 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 CHKBQ9Y259 395 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 DRG1Q9Y295 367 aaKnown RBP5.68□□□□□ -1.5
COPS3-208ENST00000486032 ATP8A1Q9Y2Q0 1164 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 PCDHB11Q9Y5F2 797 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 RAI2Q9Y5P3 530 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 MUC22E2RYF6 1773 aaPredicted RBP5.67□□□□□ -1.5
COPS3-208ENST00000486032 VPS13AQ96RL7 3174 aa5.67□□□□□ -1.5
COPS3-208ENST00000486032 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.67□□□□□ -1.5
COPS3-208ENST00000486032 C5orf60A6NFR6 353 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms