RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 RFFLQ8WZ73 363 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 MAML1Q92585 1016 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 KLK6Q92876 244 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 CELF6Q96J87 481 aaKnown RBP7.06□□□□□ -1.28
VPS50-218ENST00000485994 BTBD6Q96KE9 485 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 NUDCD1Q96RS6 583 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 CHP1Q99653 195 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 MGME1Q9BQP7 344 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 DUSP23Q9BVJ7 150 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 CINPQ9BW66 212 aaPredicted RBP7.06□□□□□ -1.28
VPS50-218ENST00000485994 SP110Q9HB58 689 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 ATP13A2Q9NQ11 1180 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.06□□□□□ -1.28
VPS50-218ENST00000485994 NLGN3Q9NZ94 848 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 FTSJ1Q9UET6 329 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 SALL4Q9UJQ4 1053 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 FRYQ5TBA9 3013 aa7.06□□□□□ -1.28
VPS50-218ENST00000485994 DFFAO00273 331 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 MUSKO15146 869 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 MATN3O15232 486 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 MMP20O60882 483 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 GP1BAP07359 652 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 CKMT1AP12532 417 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 MX2P20592 715 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 XPAP23025 273 aaPredicted RBP7.05□□□□□ -1.28
VPS50-218ENST00000485994 KDELR1P24390 212 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 TEAD1P28347 426 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 MMP12P39900 470 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 GARSP41250 739 aaKnown RBP7.05□□□□□ -1.28
VPS50-218ENST00000485994 RGRP47804 291 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 SCNN1BP51168 640 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 ADKP55263 362 aaKnown RBP7.05□□□□□ -1.28
VPS50-218ENST00000485994 CLDN2P57739 230 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 GALNT2Q10471 571 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 DPYSL3Q14195 570 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 LRRC14Q15048 493 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 IFI16Q16666 785 aaKnown RBP7.05□□□□□ -1.28
VPS50-218ENST00000485994 SMTNL2Q2TAL5 461 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 ATP13A4Q4VNC1 1196 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 ANKRD20A8PQ5CZ79 823 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 TIGD7Q6NT04 549 aaPredicted RBP7.05□□□□□ -1.28
VPS50-218ENST00000485994 LVRNQ6Q4G3 990 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 LIPIQ6XZB0 460 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 ARHGAP36Q6ZRI8 547 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 DPPA4Q7L190 304 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 PARGQ86W56 976 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 GATAD2AQ86YP4 633 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 CAMK1DQ8IU85 385 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 TP53INP2Q8IXH6 220 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 CCDC170Q8IYT3 715 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 SLC22A18ASQ8N1D0 253 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 EID2Q8N6I1 236 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 PNPLA1Q8N8W4 532 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 TC2NQ8N9U0 490 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 KCTD6Q8NC69 237 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 NSMCE1Q8WV22 266 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 HSPH1Q92598 858 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 SCRN2Q96FV2 425 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 CNDP2Q96KP4 475 aaKnown RBP7.05□□□□□ -1.28
VPS50-218ENST00000485994 CALR3Q96L12 384 aaKnown RBP7.05□□□□□ -1.28
VPS50-218ENST00000485994 NSMCE3Q96MG7 304 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 RNF157Q96PX1 679 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 CALN1Q9BXU9 219 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 PACSIN1Q9BY11 444 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 BRD8Q9H0E9 1235 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 DEF6Q9H4E7 631 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 PCDH12Q9NPG4 1184 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 NCKIPSDQ9NZQ3 722 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 GGT7Q9UJ14 662 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 KLK13Q9UKR3 277 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 PHTF1Q9UMS5 762 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 CA5BQ9Y2D0 317 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 ATP8A1Q9Y2Q0 1164 aa7.05□□□□□ -1.28
VPS50-218ENST00000485994 ASPMQ8IZT6 3477 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 FAM208BQ5VWN6 2430 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 A0A0A6YYK5 440 aaPredicted RBP7.04□□□□□ -1.28
VPS50-218ENST00000485994 EME2A4GXA9 379 aaPredicted RBP7.04□□□□□ -1.28
VPS50-218ENST00000485994 C3orf70A6NLC5 250 aaPredicted RBP7.04□□□□□ -1.28
VPS50-218ENST00000485994 C1QTNF9BB2RNN3 333 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 H3BM21 787 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 J3QL48 77 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 PSMD11O00231 422 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 TRIM38O00635 465 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 TNFRSF10CO14798 259 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 SIGLEC6O43699 453 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 LZTS3O60299 673 aaPredicted RBP7.04□□□□□ -1.28
VPS50-218ENST00000485994 FZD6O60353 706 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 RFPL3O75679 317 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 PIGNO95427 931 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 CD48P09326 243 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 C1QTNF9P0C862 333 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 ALPPL2P10696 532 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 ZFXP17010 805 aaPredicted RBP7.04□□□□□ -1.28
VPS50-218ENST00000485994 ITIH2P19823 946 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 FECHP22830 423 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 LORP23490 312 aaPredicted RBP7.04□□□□□ -1.28
VPS50-218ENST00000485994 IGFALSP35858 605 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 MMP13P45452 471 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 ACADVLP49748 655 aa7.04□□□□□ -1.28
VPS50-218ENST00000485994 SMCPP49901 116 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms