RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 C6P13671 934 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 HNRNPA2B1P22626 353 aaKnown RBP11.9□□□□□ -0.5
HPS4-214ENST00000485842 PSMB4P28070 264 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 AKT2P31751 481 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 NUDT1P36639 197 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 GRIA4P48058 902 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 LIG3P49916 1009 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 C21orf59P57076 290 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 RALGDSQ12967 914 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 SNX1Q13596 522 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 FGL2Q14314 439 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 GALNT3Q14435 633 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 PTPRRQ15256 657 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 ANKRD20A2Q5SQ80 823 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 ANKRD20A1Q5TYW2 823 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 ANKRD20A3Q5VUR7 823 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 DENND2CQ68D51 928 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 ZSCAN30Q86W11 494 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 NDUFAF2Q8N183 169 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 FAM71DQ8N9W8 422 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 PIH1D2Q8WWB5 315 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 MAIP1Q8WWC4 291 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 SPOCK2Q92563 424 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 RMDN1Q96DB5 314 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 IFT43Q96FT9 208 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 PBKQ96KB5 322 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 SPATA13Q96N96 652 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 SMIM14Q96QK8 99 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 WDR24Q96S15 920 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 OSBPL9Q96SU4 736 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 TMEM121Q9BTD3 319 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 EDEM2Q9BV94 578 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 C1QTNF2Q9BXJ5 285 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 GBA3Q9H227 469 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 RXFP3Q9NSD7 469 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 FAM153AQ9UHL3 310 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 TRHDEQ9UKU6 1024 aa11.9□□□□□ -0.5
HPS4-214ENST00000485842 MYO15AQ9UKN7 3530 aa11.9□□□□□ -0.51
HPS4-214ENST00000485842 GVINP1Q7Z2Y8 2422 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 PIEZO1Q92508 2521 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 A0A0J9YYE9 177 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 CFAP69A5D8W1 941 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 H0Y8X5 98 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 GDF9O60383 454 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 ZNF189O75820 626 aaPredicted RBP11.89□□□□□ -0.51
HPS4-214ENST00000485842 PRLP01236 227 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 TRBC1P01850 177 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 WNT1P04628 370 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 ENGP17813 658 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 CD38P28907 300 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 VIPR1P32241 457 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 HNF1BP35680 557 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 ATXN3P54252 364 aaPredicted RBP11.89□□□□□ -0.51
HPS4-214ENST00000485842 GDF10P55107 478 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 CLDN2P57739 230 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 LMNB2Q03252 620 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 GRIK2Q13002 908 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 ARHGEF7Q14155 803 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 STAT4Q14765 748 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 ACOX1Q15067 660 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 SIX1Q15475 284 aaPredicted RBP11.89□□□□□ -0.51
HPS4-214ENST00000485842 SLC14A2Q15849 920 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 CNGA3Q16281 694 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 LIPIQ6XZB0 460 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 ARHGEF18Q6ZSZ5 1173 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 PTAR1Q7Z6K3 402 aaPredicted RBP11.89□□□□□ -0.51
HPS4-214ENST00000485842 TSPAN33Q86UF1 283 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 TAB3Q8N5C8 712 aaPredicted RBP11.89□□□□□ -0.51
HPS4-214ENST00000485842 IPMKQ8NFU5 416 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 OR2I1PQ8NGU4 316 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 COG1Q8WTW3 980 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 OXNAD1Q96HP4 312 aaPredicted RBP11.89□□□□□ -0.51
HPS4-214ENST00000485842 MS4A14Q96JA4 679 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 FCRL5Q96RD9 977 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 MCCC1Q96RQ3 725 aaPredicted RBP11.89□□□□□ -0.51
HPS4-214ENST00000485842 C1QTNF7Q9BXJ2 289 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 ADGRE3Q9BY15 652 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 FRMD8P1Q9BZ68 369 aaPredicted RBP11.89□□□□□ -0.51
HPS4-214ENST00000485842 USP29Q9HBJ7 922 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 SMARCAL1Q9NZC9 954 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 SNX12Q9UMY4 172 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 ZNF148Q9UQR1 794 aa11.89□□□□□ -0.51
HPS4-214ENST00000485842 PTPRZ1P23471 2315 aaPredicted RBP11.88□□□□□ -0.51
HPS4-214ENST00000485842 A0A0U1RQS6 177 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.88□□□□□ -0.51
HPS4-214ENST00000485842 A0A1W2PR77 199 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 CAPN8A6NHC0 703 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 PGRMC1O00264 195 aaKnown RBP11.88□□□□□ -0.51
HPS4-214ENST00000485842 ARHGAP33O14559 1287 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 RAD51BO15315 384 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 FOXD2O60548 495 aaPredicted RBP11.88□□□□□ -0.51
HPS4-214ENST00000485842 OPHN1O60890 802 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 RECQL5O94762 991 aaPredicted RBP11.88□□□□□ -0.51
HPS4-214ENST00000485842 HEXIM1O94992 359 aaKnown RBP11.88□□□□□ -0.51
HPS4-214ENST00000485842 IFNB1P01574 187 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 SLC4A1P02730 911 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 SYPP08247 313 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 LHCGRP22888 699 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 TNNT3P45378 269 aaPredicted RBP11.88□□□□□ -0.51
HPS4-214ENST00000485842 GEMP55040 296 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms