RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 TCP1P17987 556 aaKnown RBP11.93□□□□□ -0.5
APTX-227ENST00000485479 HNF1BP35680 557 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 CSNK1EP49674 416 aaKnown RBP11.93□□□□□ -0.5
APTX-227ENST00000485479 LIG3P49916 1009 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 CCNG2Q16589 344 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 KDELC1Q6UW63 502 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 HORMAD1Q86X24 394 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 PELI3Q8N2H9 469 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 ACTRT1Q8TDG2 376 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 CXorf40AQ8TE69 158 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 SERAC1Q96JX3 654 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 TRIB3Q96RU7 358 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 FICDQ9BVA6 458 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 AASDHPPTQ9NRN7 309 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 FAM153AQ9UHL3 310 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 CD84Q9UIB8 345 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 GMEB2Q9UKD1 530 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 PILRBQ9UKJ0 227 aa11.93□□□□□ -0.5
APTX-227ENST00000485479 TTC7AQ9ULT0 858 aaPredicted RBP11.93□□□□□ -0.5
APTX-227ENST00000485479 A0A1W2PPC4 97 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 AURKAO14965 403 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 BUD23O43709 281 aaKnown RBP11.92□□□□□ -0.5
APTX-227ENST00000485479 GFRA3O60609 400 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 ELFN1P0C7U0 828 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 CDK18Q07002 472 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 CNGA3Q16281 694 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 QPCTQ16769 361 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 TMEM259Q4ZIN3 620 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 PRAMEF14Q5SWL7 426 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 LRRC66Q68CR7 880 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 LAIR1Q6GTX8 287 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 ERAP2Q6P179 960 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 KLHL7Q8IXQ5 586 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 CCDC89Q8N998 374 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 CADM4Q8NFZ8 388 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 FOXJ1Q92949 421 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 TADA1Q96BN2 335 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 IFT43Q96FT9 208 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 FCRL5Q96RD9 977 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 VAT1Q99536 393 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 FSD1LQ9BXM9 530 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 PREBQ9HCU5 417 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 TRHDEQ9UKU6 1024 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 TP53BP1Q12888 1972 aaPredicted RBP11.92□□□□□ -0.5
APTX-227ENST00000485479 A0A0J9YYE9 177 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 C5orf60A6NFR6 353 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 LATO43561 262 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 OPHN1O60890 802 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 EPN2O95208 641 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 CLDN7O95471 211 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 TRBC1P01850 177 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 WNT1P04628 370 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 ITGAVP06756 1048 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 GM2AP17900 193 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 ETV3P41162 512 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 IRX4P78413 519 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 SFSWAPQ12872 951 aaKnown RBP11.92□□□□□ -0.5
APTX-227ENST00000485479 HS1BP3Q53T59 392 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 TRIM61Q5EBN2 209 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 SIRPB2Q5JXA9 342 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 CCDC137Q6PK04 289 aaKnown RBP11.92□□□□□ -0.5
APTX-227ENST00000485479 LIPIQ6XZB0 460 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 HSD11B1LQ7Z5J1 315 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 PDCD7Q8N8D1 485 aaKnown RBP11.92□□□□□ -0.5
APTX-227ENST00000485479 FEM1CQ96JP0 617 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 FERMT1Q9BQL6 677 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 SLC17A9Q9BYT1 436 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 TM9SF3Q9HD45 589 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 MBNL1Q9NR56 388 aaKnown RBP11.92□□□□□ -0.5
APTX-227ENST00000485479 HAUS2Q9NVX0 235 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 FNDC3AQ9Y2H6 1198 aaKnown RBP11.92□□□□□ -0.5
APTX-227ENST00000485479 SPO11Q9Y5K1 396 aa11.92□□□□□ -0.5
APTX-227ENST00000485479 TMEM131Q92545 1883 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 C1orf232A0A0U1RR37 186 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 GOLGA6CA6NDK9 693 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 GOLGA6BA6NDN3 693 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 POM121BA6NF01 834 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 ANKRD66B4E2M5 251 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 ATXN1LP0C7T5 689 aaKnown RBP11.91□□□□□ -0.5
APTX-227ENST00000485479 GOLGA6DP0CG33 693 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 RPL22P35268 128 aaKnown RBP11.91□□□□□ -0.5
APTX-227ENST00000485479 GRIA1P42261 906 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 RPS21P63220 83 aaKnown RBP11.91□□□□□ -0.5
APTX-227ENST00000485479 ACOX1Q15067 660 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 RALGPS1Q5JS13 557 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 ITPRIPL1Q6GPH6 555 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 CRTC1Q6UUV9 634 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 USP45Q70EL2 814 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 DPPA4Q7L190 304 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 LYSMD3Q7Z3D4 306 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 C11orf74Q86VG3 221 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 TRIM69Q86WT6 500 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 SYT12Q8IV01 421 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 C1orf216Q8TAB5 229 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 FUBP1Q96AE4 644 aaKnown RBP11.91□□□□□ -0.5
APTX-227ENST00000485479 RAB7BQ96AH8 199 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 EID2BQ96D98 161 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 ETNK1Q9HBU6 452 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 RAB6BQ9NRW1 208 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 GOLGA6AQ9NYA3 693 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms