RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 NT5C3BQ969T7 300 aa9.31□□□□□ -0.92
USP16-206ENST00000485067 TMA16Q96EY4 203 aaKnown RBP9.31□□□□□ -0.92
USP16-206ENST00000485067 C11orf24Q96F05 449 aaPredicted RBP9.31□□□□□ -0.92
USP16-206ENST00000485067 SPATA13Q96N96 652 aa9.31□□□□□ -0.92
USP16-206ENST00000485067 NAT9Q9BTE0 207 aa9.31□□□□□ -0.92
USP16-206ENST00000485067 DTLQ9NZJ0 730 aa9.31□□□□□ -0.92
USP16-206ENST00000485067 DLGAP2Q9P1A6 1054 aa9.31□□□□□ -0.92
USP16-206ENST00000485067 EGFL7Q9UHF1 273 aa9.31□□□□□ -0.92
USP16-206ENST00000485067 STAP1Q9ULZ2 295 aa9.31□□□□□ -0.92
USP16-206ENST00000485067 FAF1Q9UNN5 650 aaPredicted RBP9.31□□□□□ -0.92
USP16-206ENST00000485067 MAPRE3Q9UPY8 281 aa9.31□□□□□ -0.92
USP16-206ENST00000485067 STK38LQ9Y2H1 464 aa9.31□□□□□ -0.92
USP16-206ENST00000485067 PLLPQ9Y342 182 aa9.31□□□□□ -0.92
USP16-206ENST00000485067 Q9Y3F1 56 aa9.31□□□□□ -0.92
USP16-206ENST00000485067 PCDHGA8Q9Y5G5 932 aa9.31□□□□□ -0.92
USP16-206ENST00000485067 PCDHGA11Q9Y5H2 935 aa9.31□□□□□ -0.92
USP16-206ENST00000485067 RAD54BQ9Y620 910 aa9.31□□□□□ -0.92
USP16-206ENST00000485067 STON1Q9Y6Q2 735 aa9.31□□□□□ -0.92
USP16-206ENST00000485067 A0A1B0GWJ7 208 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 SH3D21A4FU49 640 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 C9IYK1 514 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 I3L4J1 428 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 PLOD3O60568 738 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 SIN3BO75182 1162 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 CLN5O75503 358 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 PIAS1O75925 651 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 USP1O94782 785 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 DKK1O94907 266 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 PABPC4LP0CB38 370 aaKnown RBP9.3□□□□□ -0.92
USP16-206ENST00000485067 ACAT1P24752 427 aaKnown RBP9.3□□□□□ -0.92
USP16-206ENST00000485067 PTPN4P29074 926 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 MAPK8P45983 427 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 GLUD2P49448 558 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 PSEN2P49810 448 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 RENBPP51606 427 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 ARFIP2P53365 341 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 RABGGTBP53611 331 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 LILRA4P59901 499 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 CYP4F2P78329 520 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 CACNB2Q08289 660 aaPredicted RBP9.3□□□□□ -0.92
USP16-206ENST00000485067 CYP4F3Q08477 520 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 GRSF1Q12849 480 aaKnown RBP eCLIP9.3□□□□□ -0.92
USP16-206ENST00000485067 PDK1Q15118 436 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 MAPKAPK3Q16644 382 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 TAF1BQ53T94 588 aaPredicted RBP9.3□□□□□ -0.92
USP16-206ENST00000485067 UBXN11Q5T124 520 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 FAXCQ5TGI0 409 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 STEAP4Q687X5 459 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 LRRC8BQ6P9F7 803 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 ZNF534Q76KX8 674 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 CLNKQ7Z7G1 428 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 CCDC185Q8N715 623 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 VPS35Q96QK1 796 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 SLC9A7Q96T83 725 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 REV1Q9UBZ9 1251 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 ATP6V1HQ9UI12 483 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 HAO1Q9UJM8 370 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 PCDHGA3Q9Y5H0 932 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 MAD1L1Q9Y6D9 718 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 TSC2P49815 1807 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 GOLGA8QA0A0J9YX86 632 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 GOLGA8OA6NCC3 632 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 SDR42E2A6NKP2 422 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 GOLGA8NF8WBI6 632 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 RFPL1O75677 317 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 DNAJB5O75953 348 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 ALDH1A2O94788 518 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 BAG2O95816 211 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 CHEK2O96017 543 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 T-ENOLP0DO92 83 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 GOT1P17174 413 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 NPR3P17342 541 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 ATP6V1C1P21283 382 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 CRHR1P34998 444 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 ATXN1P54253 815 aaKnown RBP9.3□□□□□ -0.92
USP16-206ENST00000485067 ZBTB16Q05516 673 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 CDC16Q13042 620 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 PDZD4Q76G19 769 aaPredicted RBP9.3□□□□□ -0.92
USP16-206ENST00000485067 MTDHQ86UE4 582 aaKnown RBP9.3□□□□□ -0.92
USP16-206ENST00000485067 PIGZQ86VD9 579 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 TSPYL5Q86VY4 417 aaPredicted RBP9.3□□□□□ -0.92
USP16-206ENST00000485067 RNF135Q8IUD6 432 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 SLC22A9Q8IVM8 553 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 DEFB106AQ8N104 65 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 CCDC33Q8N5R6 958 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 AGAP11Q8TF27 550 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 PTCD2Q8WV60 388 aaKnown RBP9.3□□□□□ -0.92
USP16-206ENST00000485067 NDRG1Q92597 394 aaKnown RBP9.3□□□□□ -0.92
USP16-206ENST00000485067 C7orf26Q96N11 449 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 SPATA16Q9BXB7 569 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 RUBCNLQ9H714 662 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 TLE6Q9H808 572 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 PLAC1Q9HBJ0 212 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 PALMDQ9NP74 551 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 IARS2Q9NSE4 1012 aaKnown RBP9.3□□□□□ -0.92
USP16-206ENST00000485067 CXXC1Q9P0U4 656 aaPredicted RBP9.3□□□□□ -0.92
USP16-206ENST00000485067 TRPS1Q9UHF7 1281 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 TRIM33Q9UPN9 1127 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 LRRC42Q9Y546 428 aa9.3□□□□□ -0.92
USP16-206ENST00000485067 CXorf49A8MYA2 514 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms