RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 INPP5DQ92835 1189 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 SMARCE1Q969G3 411 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 ZC3HAV1LQ96H79 300 aaKnown RBP6.88□□□□□ -1.31
UBR3-210ENST00000484596 SIN3AQ96ST3 1273 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 KRTAP1-5Q9BYS1 174 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 ADD3Q9UEY8 706 aaKnown RBP6.88□□□□□ -1.31
UBR3-210ENST00000484596 DNMBPQ6XZF7 1577 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 RUSC2Q8N2Y8 1516 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 CACNA1IQ9P0X4 2223 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 KLRF2D3W0D1 207 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 USP17L23D6RBM5 183 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 MT-CYBP00156 380 aaPredicted RBP6.87□□□□□ -1.31
UBR3-210ENST00000484596 TFP02787 698 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 CYP1A2P05177 515 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 SPARCP09486 303 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 SRD5A1P18405 259 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 ACTN2P35609 894 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 GNAQP50148 359 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 SELENOVP59797 346 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 WTAPQ15007 396 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 CCDC96Q2M329 555 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 OTUD1Q5VV17 481 aaPredicted RBP6.87□□□□□ -1.31
UBR3-210ENST00000484596 TMCO3Q6UWJ1 677 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 SAMD14Q8IZD0 417 aaPredicted RBP6.87□□□□□ -1.31
UBR3-210ENST00000484596 C7orf57Q8NEG2 295 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 FAM149B1Q96BN6 582 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 BBS4Q96RK4 519 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 POLDIP3Q9BY77 421 aaKnown RBP6.87□□□□□ -1.31
UBR3-210ENST00000484596 NPFFR1Q9GZQ6 430 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 MUC13Q9H3R2 512 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 EBF3Q9H4W6 596 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 PCDHB16Q9NRJ7 776 aa6.87□□□□□ -1.31
UBR3-210ENST00000484596 ARHGEF11O15085 1522 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 UTYO14607 1347 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 RPS10-NUDT3A0A1W2PQS6 291 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 EIF3CLB5ME19 914 aaKnown RBP6.86□□□□□ -1.31
UBR3-210ENST00000484596 H0YGN5 161 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 ATP2C2O75185 946 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 STARD3NLO95772 234 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 PSG1P11464 419 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 AKR1B1P15121 316 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 TNFRSF1BP20333 461 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 GNLYP22749 145 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 DCTDP32321 178 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 CLCN5P51795 746 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 CLDN2P57739 230 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 ST3GAL1Q11201 340 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 CAPSQ13938 189 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 GPR18Q14330 331 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 CES5AQ6NT32 575 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 TRILQ7L0X0 811 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 FAM9BQ8IZU0 186 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 GJC3Q8NFK1 279 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 NSMCE1Q8WV22 266 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 IL36RNQ9UBH0 155 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 RAI2Q9Y5P3 530 aa6.86□□□□□ -1.31
UBR3-210ENST00000484596 IFT140Q96RY7 1462 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 LDLRAD4O15165 306 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 PORP16435 677 aaPredicted RBP6.85□□□□□ -1.31
UBR3-210ENST00000484596 NFKBIAP25963 317 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 HDAC4P56524 1084 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 CREB5Q02930 508 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 GOLGA8DPQ0D2H9 430 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 ITGADQ13349 1161 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 LEXMQ3ZCV2 418 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 FAM133BQ5BKY9 247 aaKnown RBP6.85□□□□□ -1.31
UBR3-210ENST00000484596 PRAMEF19Q5SWL8 479 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 MON1BQ7L1V2 547 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 SFTPA2Q8IWL1 248 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 ZCCHC9Q8N567 271 aaKnown RBP6.85□□□□□ -1.31
UBR3-210ENST00000484596 TTC39CQ8N584 583 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 SNAPC3Q92966 411 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 MAP7D2Q96T17 732 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 MXRA8Q9BRK3 442 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 NUF2Q9BZD4 464 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 PLSCR4Q9NRQ2 329 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 HAO1Q9UJM8 370 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 LYVE1Q9Y5Y7 322 aa6.85□□□□□ -1.31
UBR3-210ENST00000484596 hCG_1807616A0A1W2PRN6 198 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 HSPB2A8KAH6 182 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 H3BNX3 289 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 VWA5AO00534 786 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 TGFB1I1O43294 461 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 TSPAN9O75954 239 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 HOXB6P17509 224 aaKnown RBP6.84□□□□□ -1.31
UBR3-210ENST00000484596 EFNA5P52803 228 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 OLR1P78380 273 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 MC1RQ01726 317 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 PPATQ06203 517 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 CHAF1BQ13112 559 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 ACVR2BQ13705 512 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 ARHGEF6Q15052 776 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 HSPB2Q16082 182 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 TCTN1Q2MV58 587 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 DPCR1Q3MIW9 517 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 DNTTIP2Q5QJE6 756 aaKnown RBP6.84□□□□□ -1.31
UBR3-210ENST00000484596 IKBIPQ70UQ0 350 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 ZDHHC17Q8IUH5 632 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 FBXL8Q96CD0 374 aa6.84□□□□□ -1.31
UBR3-210ENST00000484596 PIP5K1AQ99755 562 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms