RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 SDCBP2Q9H190 292 aa4.45□□□□□ -1.7
SPTA1-206ENST00000484520 FBXO44Q9H4M3 255 aa4.45□□□□□ -1.7
SPTA1-206ENST00000484520 LRRC4Q9HBW1 653 aa4.45□□□□□ -1.7
SPTA1-206ENST00000484520 CSNK1G1Q9HCP0 422 aa4.45□□□□□ -1.7
SPTA1-206ENST00000484520 TAS2R14Q9NYV8 317 aa4.45□□□□□ -1.7
SPTA1-206ENST00000484520 USP36Q9P275 1121 aaKnown RBP4.45□□□□□ -1.7
SPTA1-206ENST00000484520 RCOR3Q9P2K3 495 aaPredicted RBP4.45□□□□□ -1.7
SPTA1-206ENST00000484520 TRIM10Q9UDY6 481 aa4.45□□□□□ -1.7
SPTA1-206ENST00000484520 RASAL2Q9UJF2 1139 aa4.45□□□□□ -1.7
SPTA1-206ENST00000484520 PCDHA3Q9Y5H8 950 aa4.45□□□□□ -1.7
SPTA1-206ENST00000484520 SPO11Q9Y5K1 396 aa4.45□□□□□ -1.7
SPTA1-206ENST00000484520 ALG6Q9Y672 507 aa4.45□□□□□ -1.7
SPTA1-206ENST00000484520 UQCRHLA0A096LP55 91 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 TCRBV5S1A1TA0A578 114 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 C2CD4BA6NLJ0 364 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 TBKBP1A7MCY6 615 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 E5RJQ4 531 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 PPEF2O14830 753 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 PRPSAP2O60256 369 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 DAB1O75553 588 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 RTN3O95197 1032 aaPredicted RBP4.44□□□□□ -1.7
SPTA1-206ENST00000484520 ZRANB2O95218 330 aaKnown RBP eCLIP4.44□□□□□ -1.7
SPTA1-206ENST00000484520 FTCDO95954 541 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 F9P00740 461 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 IGLV2-14P01704 120 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 ASLP04424 464 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 GALTP07902 379 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 UQCRHP07919 91 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 SPATA31D3P0C874 917 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 SLC2A3P11169 496 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 ITGAMP11215 1152 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 ZFXP17010 805 aaPredicted RBP4.44□□□□□ -1.7
SPTA1-206ENST00000484520 GPD1P21695 349 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 PSMA2P25787 234 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 CHRNA3P32297 505 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 CYP2C18P33260 490 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 PTPN9P43378 593 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 OR1G1P47890 313 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 PPP3CCP48454 512 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 FNTAP49354 379 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 TUFMP49411 452 aaKnown RBP4.44□□□□□ -1.7
SPTA1-206ENST00000484520 KPNA1P52294 538 aaPredicted RBP4.44□□□□□ -1.7
SPTA1-206ENST00000484520 CCL23P55773 120 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 RPL10AP62906 217 aaKnown RBP4.44□□□□□ -1.7
SPTA1-206ENST00000484520 KRT17Q04695 432 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 FPGSQ05932 587 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 PLD1Q13393 1074 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 DHX34Q14147 1143 aaKnown RBP4.44□□□□□ -1.7
SPTA1-206ENST00000484520 TFDP2Q14188 446 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 SMC1AQ14683 1233 aaKnown RBP4.44□□□□□ -1.7
SPTA1-206ENST00000484520 MESDQ14696 234 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 GPNMBQ14956 572 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 BRD3Q15059 726 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 PDK2Q15119 407 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 LRRC26Q2I0M4 334 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 USP41Q3LFD5 358 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 PTPN20Q4JDL3 420 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 MDH1BQ5I0G3 518 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 FAM102AQ5T9C2 384 aaPredicted RBP4.44□□□□□ -1.7
SPTA1-206ENST00000484520 TPGS2Q68CL5 300 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 ANKS6Q68DC2 871 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 DRICH1Q6PGQ1 229 aaPredicted RBP4.44□□□□□ -1.7
SPTA1-206ENST00000484520 SPATA31D4Q6ZUB0 917 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 BZW1Q7L1Q6 419 aaKnown RBP4.44□□□□□ -1.7
SPTA1-206ENST00000484520 STRADAQ7RTN6 431 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 CNPY4Q8N129 248 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 SLC44A3Q8N4M1 653 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 MMGT1Q8N4V1 131 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 CDYL2Q8N8U2 506 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 SPATA4Q8NEY3 305 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 CD101Q93033 1021 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 ARHGEF26Q96DR7 871 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 SPATA17Q96L03 361 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 C8orf48Q96LL4 319 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 RNPC3Q96LT9 517 aaKnown RBP4.44□□□□□ -1.7
SPTA1-206ENST00000484520 ZNF558Q96NG5 402 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 MCEEQ96PE7 176 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 TWNKQ96RR1 684 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 CPXM1Q96SM3 734 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 LBHD1Q9BQE6 289 aaPredicted RBP4.44□□□□□ -1.7
SPTA1-206ENST00000484520 FERMT1Q9BQL6 677 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 ZCWPW1Q9H0M4 648 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 RAB17Q9H0T7 212 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 TSPYL1Q9H0U9 437 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 ZMAT4Q9H898 229 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 POPDC2Q9HBU9 364 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 ACP6Q9NPH0 428 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 RNF7Q9UBF6 113 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 HMGXB4Q9UGU5 601 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 DPP7Q9UHL4 492 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 USP18Q9UMW8 372 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 COG5Q9UP83 839 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 COL4A6Q14031 1691 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 CLUHO75153 1309 aa4.44□□□□□ -1.7
SPTA1-206ENST00000484520 CCDC151A5D8V7 595 aa4.43□□□□□ -1.7
SPTA1-206ENST00000484520 CBX4O00257 560 aa4.43□□□□□ -1.7
SPTA1-206ENST00000484520 MDM4O15151 490 aa4.43□□□□□ -1.7
SPTA1-206ENST00000484520 CEP104O60308 925 aa4.43□□□□□ -1.7
SPTA1-206ENST00000484520 DNAJC8O75937 253 aaPredicted RBP4.43□□□□□ -1.7
SPTA1-206ENST00000484520 SEC24DO94855 1032 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms