RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SLC22A18ASQ8N1D0 253 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 BBS5Q8N3I7 341 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 CHST14Q8NCH0 376 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 TTC9Q92623 222 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 RAB7BQ96AH8 199 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 ATXN7L3BQ96GX2 97 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 DUSP23Q9BVJ7 150 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 CPEB1Q9BZB8 566 aaKnown RBP10.1□□□□□ -0.79
CPSF4-213ENST00000484112 DPH1Q9BZG8 443 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 TNKS2Q9H2K2 1166 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 CLMPQ9H6B4 373 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 SP110Q9HB58 689 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 ASCL3Q9NQ33 180 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 HECAQ9UBI9 543 aaPredicted RBP10.1□□□□□ -0.79
CPSF4-213ENST00000484112 AMACRQ9UHK6 382 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 ZFR2Q9UPR6 939 aaKnown RBP10.1□□□□□ -0.79
CPSF4-213ENST00000484112 BPTFQ12830 3046 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 LY6G6EA0A0G2JKS1 128 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 A0A1W2PQ67 120 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 A6NNZ2 444 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 ARHGAP6O43182 974 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 SPOPO43791 374 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 PALMO75781 387 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 TMCC1O94876 653 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 PAK4O96013 591 aaPredicted RBP10.09□□□□□ -0.79
CPSF4-213ENST00000484112 COMTP21964 271 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 AMPD1P23109 780 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 KDELR1P24390 212 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 TAS2R40P59535 323 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 RHOAP61586 193 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 HNRNPKP61978 463 aaKnown RBP eCLIP10.09□□□□□ -0.793e-6■■■■□ 21
CPSF4-213ENST00000484112 KIF5AQ12840 1032 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 GSE1Q14687 1217 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 DEFB133Q30KQ1 61 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 MYLK3Q32MK0 819 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 TIGD7Q6NT04 549 aaPredicted RBP10.09□□□□□ -0.79
CPSF4-213ENST00000484112 RAD9BQ6WBX8 426 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 CCDC81Q6ZN84 652 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 ERN2Q76MJ5 926 aaKnown RBP10.09□□□□□ -0.79
CPSF4-213ENST00000484112 BZW1Q7L1Q6 419 aaKnown RBP10.09□□□□□ -0.79
CPSF4-213ENST00000484112 EFL1Q7Z2Z2 1120 aaKnown RBP10.09□□□□□ -0.79
CPSF4-213ENST00000484112 ABI3BPQ7Z7G0 1075 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 NPWQ8N729 165 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 LMX1AQ8TE12 382 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 NSMCE1Q8WV22 266 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 BMFQ96LC9 184 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 ZNF641Q96N77 438 aaPredicted RBP10.09□□□□□ -0.79
CPSF4-213ENST00000484112 PSKH2Q96QS6 385 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 TUBGCP5Q96RT8 1024 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 SLC17A9Q9BYT1 436 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 TSGA10Q9BZW7 698 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 SYNDIG1Q9H7V2 258 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 USP29Q9HBJ7 922 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 DKK3Q9UBP4 350 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 SEPT3Q9UH03 358 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 FCF1Q9Y324 198 aaKnown RBP10.09□□□□□ -0.79
CPSF4-213ENST00000484112 ALG6Q9Y672 507 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 WASF2Q9Y6W5 498 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 U3KQA8 63 aa10.09□□□□□ -0.79
CPSF4-213ENST00000484112 TDRD6O60522 2096 aaKnown RBP10.09□□□□□ -0.79
CPSF4-213ENST00000484112 A0A1W2PNU3 283 aaPredicted RBP10.08□□□□□ -0.8
CPSF4-213ENST00000484112 GOLGA6L3A6NEY3 463 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 POM121BA6NF01 834 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 H3BM21 787 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 DFFAO00273 331 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 AP1G1O43747 822 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 BUB1BO60566 1050 aaPredicted RBP10.08□□□□□ -0.8
CPSF4-213ENST00000484112 LEFTY1O75610 366 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 CES1P23141 567 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 CCNCP24863 283 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 DNA2P51530 1060 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 NEK3P51956 506 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 GALNT2Q10471 571 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 PDE1CQ14123 709 aaPredicted RBP10.08□□□□□ -0.8
CPSF4-213ENST00000484112 TFDP2Q14188 446 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 FZD2Q14332 565 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 ZNF805Q5CZA5 627 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 ZFYVE27Q5T4F4 411 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 NCBP2-AS2Q69YL0 99 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 SLC9A4Q6AI14 798 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 ZCCHC8Q6NZY4 707 aaKnown RBP10.08□□□□□ -0.8
CPSF4-213ENST00000484112 GUSBP11Q6P575 273 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 PRICKLE2Q7Z3G6 844 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 KIAA1328Q86T90 577 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 DCP2Q8IU60 420 aaKnown RBP10.08□□□□□ -0.8
CPSF4-213ENST00000484112 KATNAL2Q8IYT4 538 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 SYCE1Q8N0S2 351 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 ATPAF2Q8N5M1 289 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 RNF10Q8N5U6 811 aaKnown RBP10.08□□□□□ -0.8
CPSF4-213ENST00000484112 SPC24Q8NBT2 197 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 ZNF548Q8NEK5 533 aaPredicted RBP10.08□□□□□ -0.8
CPSF4-213ENST00000484112 PCDH19Q8TAB3 1148 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 FAM174AQ8TBP5 190 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 SPOCK2Q92563 424 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 CCDC97Q96F63 343 aaPredicted RBP10.08□□□□□ -0.8
CPSF4-213ENST00000484112 IFT43Q96FT9 208 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 MED8Q96G25 268 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 CELF6Q96J87 481 aaKnown RBP10.08□□□□□ -0.8
CPSF4-213ENST00000484112 FEM1CQ96JP0 617 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 ZNF830Q96NB3 372 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms