RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 PTPN1P18031 435 aaKnown RBP10.29□□□□□ -0.76
COL12A1-207ENST00000483888 IL4RP24394 825 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 LRRN1Q6UXK5 716 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 DPY19L3Q6ZPD9 716 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 TEX19Q8NA77 164 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 BIRC8Q96P09 236 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 REM1O75628 298 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 TPPPO94811 219 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 PITPNAQ00169 270 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 DEFA6Q01524 100 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 TIGD6Q17RP2 521 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 OVOS1Q6IE37 1185 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 ZSCAN1Q8NBB4 408 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 PAK6Q9NQU5 681 aaPredicted RBP10.29□□□□□ -0.76
COL12A1-207ENST00000483888 LRRIQ1Q96JM4 1722 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 FAM149AA5PLN7 773 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 BANF1O75531 89 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 STAU1O95793 577 aaKnown RBP10.29□□□□□ -0.76
COL12A1-207ENST00000483888 CRATP43155 626 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 EEPD1Q7L9B9 569 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 FCGR1BQ92637 280 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 KAT5Q92993 513 aa10.29□□□□□ -0.76
COL12A1-207ENST00000483888 SULT1B1O43704 296 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 TGDSO95455 350 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 MATN1P21941 496 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 RPL19P84098 196 aaKnown RBP10.28□□□□□ -0.76
COL12A1-207ENST00000483888 ZNF181Q2M3W8 571 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 GADL1Q6ZQY3 521 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 CATSPER4Q7RTX7 472 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 OR52L1Q8NGH7 329 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 MTFMTQ96DP5 389 aaKnown RBP10.28□□□□□ -0.76
COL12A1-207ENST00000483888 MUC13Q9H3R2 512 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 GABRB2P47870 512 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 PMEPA1Q969W9 287 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 OXCT2Q9BYC2 517 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-207ENST00000483888 FAM86B1E9PN63 330 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 ALDH9A1P49189 494 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 TSPAN5P62079 268 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 RELAQ04206 551 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 SWSAP1Q6NVH7 229 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 PTCD2Q8WV60 388 aaKnown RBP10.28□□□□□ -0.76
COL12A1-207ENST00000483888 AGPAT3Q9NRZ7 376 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 TAS2R7Q9NYW3 318 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 CITO14578 2027 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 CHST10O43529 356 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 EVI2BP34910 448 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 ACADSBP45954 432 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 RGS6P49758 472 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 SMIM5Q71RC9 77 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 NT5C1AQ9BXI3 368 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 ZNF304Q9HCX3 659 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 CD320Q9NPF0 282 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 ZNF302Q9NR11 478 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 FUOMA2VDF0 154 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 SGCEO43556 437 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 CHRNB1P11230 501 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 NCAM1P13591 858 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 GUCA1AP43080 201 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-207ENST00000483888 FXR2P51116 673 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL12A1-207ENST00000483888 KLF10Q13118 480 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 TLR1Q15399 786 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 PCID2Q5JVF3 399 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 OR4C6Q8NH72 309 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 SH3RF3Q8TEJ3 882 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-207ENST00000483888 RMDN3Q96TC7 470 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 SLC30A2Q9BRI3 323 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 NLNQ9BYT8 704 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 CBY1Q9Y3M2 126 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 CROCC2H7BZ55 1655 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 B8ZZF3 427 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 SNAPC5O75971 98 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 TRIM23P36406 574 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 ARFIP1P53367 373 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 SNRPFP62306 86 aaKnown RBP10.28□□□□□ -0.76
COL12A1-207ENST00000483888 SLC41A1Q8IVJ1 513 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 CD93Q9NPY3 652 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 CRLS1Q9UJA2 301 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 PCDHB8Q9UN66 801 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 USP42Q9H9J4 1324 aaKnown RBP10.28□□□□□ -0.76
COL12A1-207ENST00000483888 MYCP01106 439 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-207ENST00000483888 MT-ND1P03886 318 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 IFNA6P05013 189 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 FGRP09769 529 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 CD79BP40259 229 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 PEX6Q13608 980 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 ZNF420Q8TAQ5 688 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-207ENST00000483888 LPGAT1Q92604 370 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 POP5Q969H6 163 aaKnown RBP10.28□□□□□ -0.76
COL12A1-207ENST00000483888 DNAJC28Q9NX36 388 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 SLAIN2Q9P270 581 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 COMMD3Q9UBI1 195 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 PCDHGC3Q9UN70 934 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 CLCA1A8K7I4 914 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 DYNC1LI2O43237 492 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-207ENST00000483888 FNTBP49356 437 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 BATFQ16520 125 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 DNAJC10Q8IXB1 793 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 CST11Q9H112 138 aa10.28□□□□□ -0.76
COL12A1-207ENST00000483888 PDP1Q9P0J1 537 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-207ENST00000483888 CFL2Q9Y281 166 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms