RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 OR56A4Q8NGH8 313 aa10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 SMARCE1Q969G3 411 aa10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 HMCESQ96FZ2 354 aa10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 SLC45A3Q96JT2 553 aa10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 EXOC2Q96KP1 924 aa10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 CFAP57Q96MR6 1250 aa10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 CATSPER2Q96P56 530 aa10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 LGR4Q9BXB1 951 aa10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 KLC2Q9H0B6 622 aa10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 CYP4F12Q9HCS2 524 aa10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 PCDH12Q9NPG4 1184 aa10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 OCIAD1Q9NX40 245 aa10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 TMEM9Q9P0T7 183 aa10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 NEU3Q9UQ49 428 aa10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 ABCA12Q86UK0 2595 aa10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 PRRC2CQ9Y520 2896 aaKnown RBP10.94□□□□□ -0.66
SMARCC1-205ENST00000483847 LOC101059948A0A1B0GTJ6 334 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 PPP1R3GB7ZBB8 358 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 BUB1O43683 1085 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 KDELR3O43731 214 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 SMC2O95347 1197 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 KRT7P08729 469 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 RNF224P0DH78 156 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 RHOQP17081 205 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 BMP6P22004 513 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 XPAP23025 273 aaPredicted RBP10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 CSF2RBP32927 897 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 KRT9P35527 623 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 ETFBP38117 255 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 MAPKAPK2P49137 400 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 LIMK2P53671 638 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 MARSP56192 900 aaKnown RBP10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 KIAA1024LP59773 190 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 ELP6Q0PNE2 266 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 CDC20Q12834 499 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 AGERQ15109 404 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 UGP2Q16851 508 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 DEFB109BQ30KR1 87 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 LACTB2Q53H82 288 aaPredicted RBP10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 ANKS6Q68DC2 871 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 ATCAYQ86WG3 371 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 C17orf82Q86X59 251 aaPredicted RBP10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 ZSWIM9Q86XI8 627 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 XYLT1Q86Y38 959 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 NRROSQ86YC3 692 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 ZDHHC17Q8IUH5 632 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 PELI3Q8N2H9 469 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 ATL2Q8NHH9 583 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 NELFBQ8WX92 580 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 PATE1Q8WXA2 126 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 CCDC34Q96HJ3 373 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 DDA1Q9BW61 102 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 MAGEH1Q9H213 219 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 GPN2Q9H9Y4 310 aaPredicted RBP10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 TMEM248Q9NWD8 314 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 SLC39A1Q9NY26 324 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 LHX3Q9UBR4 397 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 OR12D3Q9UGF7 316 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 PILRAQ9UKJ1 303 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 TP53TG5Q9Y2B4 290 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 MFHAS1Q9Y4C4 1052 aa10.93□□□□□ -0.66
SMARCC1-205ENST00000483847 RP1L1Q8IWN7 2480 aaPredicted RBP10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 TSPAN11A1L157 253 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 ENO4A6NNW6 628 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 RHPN2P1A8MT19 583 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 GOLGA8SH3BPF8 625 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 CACNB4O00305 520 aaPredicted RBP10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 RAMP2O60895 175 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 ECEL1O95672 775 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 IGSF6O95976 241 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 FGF1P05230 155 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 CLCN1P35523 988 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 MMP12P39900 470 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 GABRB2P47870 512 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 SUOXP51687 545 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 STX17P56962 302 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 SNX16P57768 344 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 RHOAP61586 193 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 ATP11AP98196 1134 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 PTK2Q05397 1052 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 RAD51Q06609 339 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 KLRB1Q12918 225 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 STIM1Q13586 685 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 NR1D2Q14995 579 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 TIPARPQ7Z3E1 657 aaKnown RBP10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 EMC1Q8N766 993 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 AGBL5Q8NDL9 886 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 APOBEC4Q8WW27 367 aaKnown RBP10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 SPRY4Q9C004 299 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 NOL6Q9H6R4 1146 aaKnown RBP10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 SUDS3Q9H7L9 328 aaPredicted RBP10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 APEX2Q9UBZ4 518 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 MOSPD1Q9UJG1 213 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 TMEM59LQ9UK28 342 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 MAN1B1Q9UKM7 699 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 HPCAL4Q9UM19 191 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 CTNND2Q9UQB3 1225 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 ST14Q9Y5Y6 855 aa10.92□□□□□ -0.66
SMARCC1-205ENST00000483847 EFCAB7A8K855 629 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms