RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PGAP2Q9UHJ9 254 aa12.77□□□□□ -0.37
VPS52-218ENST00000482399 SYCE1LA8MT33 242 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 LTA4HP09960 611 aaKnown RBP12.76□□□□□ -0.37
VPS52-218ENST00000482399 GRM5P41594 1212 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 CD86P42081 329 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 PIGFQ07326 219 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 DGCR6Q14129 220 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 PRAMEF19Q5SWL8 479 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 C19orf60Q96EN9 201 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 TBCDQ9BTW9 1192 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 SP110Q9HB58 689 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 PCDH12Q9NPG4 1184 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 CASS4Q9NQ75 786 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 EXD2Q9NVH0 621 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 IPO11Q9UI26 975 aaKnown RBP12.76□□□□□ -0.37
VPS52-218ENST00000482399 U3KQV3 271 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.76□□□□□ -0.37
VPS52-218ENST00000482399 KDM1AO60341 852 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 ALOX15P16050 662 aaPredicted RBP12.76□□□□□ -0.37
VPS52-218ENST00000482399 MERTKQ12866 999 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 DPYSQ14117 519 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 EGFLAMQ63HQ2 1017 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 MIB1Q86YT6 1006 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 ZC3H15Q8WU90 426 aaKnown RBP12.76□□□□□ -0.37
VPS52-218ENST00000482399 LPPQ93052 612 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 B3GALT6Q96L58 329 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 GID8Q9NWU2 228 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 TSC22D4Q9Y3Q8 395 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 RAD54BQ9Y620 910 aa12.76□□□□□ -0.37
VPS52-218ENST00000482399 KIAA1217Q5T5P2 1943 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 GREB1LQ9C091 1923 aaPredicted RBP12.75□□□□□ -0.37
VPS52-218ENST00000482399 IGKV6-21A0A0C4DH24 114 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 ACOT8O14734 319 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 PIP5K1BO14986 540 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 B3GAT3O94766 335 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 LDLRP01130 860 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 MAGP20916 626 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 WNT3AP56704 352 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 LILRA4P59901 499 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 SOX4Q06945 474 aaPredicted RBP12.75□□□□□ -0.37
VPS52-218ENST00000482399 KYAT1Q16773 422 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 SDHAF4Q5VUM1 108 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 GPRIN1Q7Z2K8 1008 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 FBXO30Q8TB52 745 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 MAML3Q96JK9 1138 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 PPM1MQ96MI6 270 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 AKTIPQ9H8T0 292 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 FANCEQ9HB96 536 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 EVLQ9UI08 416 aaPredicted RBP12.75□□□□□ -0.37
VPS52-218ENST00000482399 DAPK2Q9UIK4 370 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 KCTD3Q9Y597 815 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 UBXN8O00124 270 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 DAB1O75553 588 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 GSSP48637 474 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 OCA2Q04671 838 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 DCAF4L1Q3SXM0 396 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 AARS2Q5JTZ9 985 aaKnown RBP12.75□□□□□ -0.37
VPS52-218ENST00000482399 CLEC20AQ6ZU45 233 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 RDH11Q8TC12 318 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 FNDC8Q8TC99 324 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 FIG4Q92562 907 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 SENP8Q96LD8 212 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 NSUN5Q96P11 429 aaKnown RBP12.75□□□□□ -0.37
VPS52-218ENST00000482399 GAD1Q99259 594 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 SPON2Q9BUD6 331 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 OLAHQ9NV23 265 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 TBC1D13Q9NVG8 400 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 FBP2O00757 339 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 NCAM2O15394 837 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 KATNA1O75449 491 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 ATE1O95260 518 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 SNAP29O95721 258 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 RBP1P09455 135 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 OXTRP30559 389 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 GGT5P36269 586 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 DIO3P55073 304 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 NRG1Q02297 640 aaPredicted RBP12.75□□□□□ -0.37
VPS52-218ENST00000482399 ABRAXAS1Q6UWZ7 409 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 CYS1Q717R9 158 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 CHERPQ8IWX8 916 aaKnown RBP12.75□□□□□ -0.37
VPS52-218ENST00000482399 RIN3Q8TB24 985 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 C9orf16Q9BUW7 83 aa12.75□□□□□ -0.37
VPS52-218ENST00000482399 THUMPD3Q9BV44 507 aaKnown RBP12.75□□□□□ -0.37
VPS52-218ENST00000482399 ELK4P28324 431 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 GRIK1P39086 918 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 HADHAP40939 763 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 GEMP55040 296 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 PMS2P3Q13401 168 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 GRB7Q14451 532 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 SNX29P2Q8IUI4 249 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 TNIP2Q8NFZ5 429 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 SCAMP5Q8TAC9 235 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 ANKRD49Q8WVL7 239 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 RMDN1Q96DB5 314 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 NPY6RQ99463 290 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 OLFM1Q99784 485 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 BRD8Q9H0E9 1235 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 COQ6Q9Y2Z9 468 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 VWA7Q9Y334 891 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 SNX5Q9Y5X3 404 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms