RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 LRRC49Q8IUZ0 686 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 PDZD8Q8NEN9 1154 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 OR6K2Q8NGY2 324 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 POLR1EQ9GZS1 481 aaKnown RBP14.53□□□□□ -0.08
CHD3-211ENST00000481999 MUC3BQ9H195 1237 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 COPG2Q9UBF2 871 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 A0A1W2PRU2 124 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 K7ERQ8 282 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 MAP3K7O43318 606 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 CD160O95971 181 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 MT-CO1P00395 513 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 RHOCP08134 193 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 SLC35E2BP0CK96 405 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 HDCP19113 662 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 MAGEA12P43365 314 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 CCDC153Q494R4 210 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 IRGCQ6NXR0 463 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 RIPOR1Q6ZS17 1223 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 OR6P1Q8NGX9 317 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 HDAC10Q969S8 669 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 ISL2Q96A47 359 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 TBATAQ96M53 351 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 ZBED2Q9BTP6 218 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 COMMD8Q9NX08 183 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 DNAJC28Q9NX36 388 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 SLC7A8Q9UHI5 535 aa14.53□□□□□ -0.08
CHD3-211ENST00000481999 PSMD3O43242 534 aa14.52□□□□□ -0.08
CHD3-211ENST00000481999 LDB2O43679 373 aa14.52□□□□□ -0.08
CHD3-211ENST00000481999 GREM1O60565 184 aa14.52□□□□□ -0.08
CHD3-211ENST00000481999 TBL1XO60907 577 aa14.52□□□□□ -0.08
CHD3-211ENST00000481999 RALBP11234 206 aa14.52□□□□□ -0.08
CHD3-211ENST00000481999 SYN1P17600 705 aa14.52□□□□□ -0.08
CHD3-211ENST00000481999 KPNA1P52294 538 aaPredicted RBP14.52□□□□□ -0.08
CHD3-211ENST00000481999 CDH4P55283 916 aa14.52□□□□□ -0.08
CHD3-211ENST00000481999 ARF5P84085 180 aa14.52□□□□□ -0.08
CHD3-211ENST00000481999 DLG1Q12959 904 aa14.52□□□□□ -0.08
CHD3-211ENST00000481999 FRG1Q14331 258 aaKnown RBP14.52□□□□□ -0.08
CHD3-211ENST00000481999 TPGS1Q6ZTW0 290 aa14.52□□□□□ -0.08
CHD3-211ENST00000481999 TMC7Q7Z402 723 aa14.52□□□□□ -0.08
CHD3-211ENST00000481999 CMTR2Q8IYT2 770 aaKnown RBP14.52□□□□□ -0.08
CHD3-211ENST00000481999 CENPLQ8N0S6 344 aaPredicted RBP14.52□□□□□ -0.08
CHD3-211ENST00000481999 PDCD6IPQ8WUM4 868 aaKnown RBP14.52□□□□□ -0.08
CHD3-211ENST00000481999 BADQ92934 168 aa14.52□□□□□ -0.08
CHD3-211ENST00000481999 DNAJC1Q96KC8 554 aaKnown RBP14.52□□□□□ -0.08
CHD3-211ENST00000481999 GPR22Q99680 433 aa14.52□□□□□ -0.08
CHD3-211ENST00000481999 OMDQ99983 421 aa14.52□□□□□ -0.08
CHD3-211ENST00000481999 SHCBP1LQ9BZQ2 653 aa14.52□□□□□ -0.08
CHD3-211ENST00000481999 OBSL1O75147 1896 aa14.52□□□□□ -0.08
CHD3-211ENST00000481999 ANKRD36A6QL64 1941 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 FAM95CA0A1B0GW59 222 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 LILRB3O75022 631 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 RFPL2O75678 378 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 CKMP06732 381 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 SBK3P0C264 359 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 CPA3P15088 417 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 ALOX15P16050 662 aaPredicted RBP14.52□□□□□ -0.09
CHD3-211ENST00000481999 SP100P23497 879 aaPredicted RBP14.52□□□□□ -0.09
CHD3-211ENST00000481999 DNAJB1P25685 340 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 EPHB3P54753 998 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 YBEYP58557 167 aaPredicted RBP14.52□□□□□ -0.09
CHD3-211ENST00000481999 TAS2R39P59534 338 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 EML3Q32P44 896 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 C5orf22Q49AR2 442 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 TSTD2Q5T7W7 516 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 VWA5B1Q5TIE3 1220 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 C1orf146Q5VVC0 180 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 NEPROQ6NW34 567 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 APLFQ8IW19 511 aaPredicted RBP14.52□□□□□ -0.09
CHD3-211ENST00000481999 TCEAL8Q8IYN2 117 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 NAT14Q8WUY8 206 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 SGF29Q96ES7 293 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 PANX3Q96QZ0 392 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 SORT1Q99523 831 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 OLFM1Q99784 485 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 ZBP1Q9H171 429 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 RHOJQ9H4E5 214 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 GPAMQ9HCL2 828 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 FNIP2Q9P278 1114 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 FBXO5Q9UKT4 447 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 CRYL1Q9Y2S2 319 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 SPO11Q9Y5K1 396 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 WASF2Q9Y6W5 498 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 MYO9BQ13459 2157 aa14.52□□□□□ -0.09
CHD3-211ENST00000481999 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.51□□□□□ -0.09
CHD3-211ENST00000481999 LOC285095A0A1B0GVY8 99 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 GPR39O43194 453 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 CPOXP36551 454 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 CCR2P41597 374 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 OXCT1P55809 520 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 ABCE1P61221 599 aaKnown RBP14.51□□□□□ -0.09
CHD3-211ENST00000481999 AP2B1P63010 937 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 ZNF177Q13360 481 aaPredicted RBP14.51□□□□□ -0.09
CHD3-211ENST00000481999 KLHDC10Q6PID8 442 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 CLEC14AQ86T13 490 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 MYLK4Q86YV6 388 aaPredicted RBP14.51□□□□□ -0.09
CHD3-211ENST00000481999 TMEM199Q8N511 208 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 TADA1Q96BN2 335 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 PLD4Q96BZ4 506 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 IFT43Q96FT9 208 aa14.51□□□□□ -0.09
CHD3-211ENST00000481999 TRMT2BQ96GJ1 504 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms