RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 CFAP58Q5T655 872 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 FAM46CQ5VWP2 391 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 ZNF776Q68DI1 518 aaPredicted RBP11.67□□□□□ -0.54
HPS4-212ENST00000481910 PGBD3Q8N328 593 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 EFCAB3Q8N7B9 438 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 PDCD7Q8N8D1 485 aaKnown RBP11.67□□□□□ -0.54
HPS4-212ENST00000481910 TSTD1Q8NFU3 115 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 IPMKQ8NFU5 416 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 HMGB4Q8WW32 186 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 VOPP1Q96AW1 172 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 LRRC45Q96CN5 670 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 KLHL32Q96NJ5 620 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 HINFPQ9BQA5 517 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 IER2Q9BTL4 223 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 MLPHQ9BV36 600 aaPredicted RBP11.67□□□□□ -0.54
HPS4-212ENST00000481910 FSD1LQ9BXM9 530 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 OSBPL1AQ9BXW6 950 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 C6orf203Q9P0P8 240 aaPredicted RBP11.67□□□□□ -0.54
HPS4-212ENST00000481910 UTP11Q9Y3A2 253 aaKnown RBP11.67□□□□□ -0.54
HPS4-212ENST00000481910 RAI2Q9Y5P3 530 aa11.67□□□□□ -0.54
HPS4-212ENST00000481910 TRAFD1O14545 582 aaPredicted RBP11.66□□□□□ -0.54
HPS4-212ENST00000481910 SOCS5O75159 536 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 SLU7O95391 586 aaKnown RBP11.66□□□□□ -0.54
HPS4-212ENST00000481910 CA4P22748 312 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 SLC8A1P32418 973 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 PSMD8P48556 350 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 CLK1P49759 484 aaKnown RBP11.66□□□□□ -0.54
HPS4-212ENST00000481910 TRAF2Q12933 501 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 SEMA5AQ13591 1074 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 CST6Q15828 149 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 GLE1Q53GS7 698 aaKnown RBP11.66□□□□□ -0.54
HPS4-212ENST00000481910 ZNF805Q5CZA5 627 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 PRCCQ92733 491 aaPredicted RBP11.66□□□□□ -0.54
HPS4-212ENST00000481910 N4BP2L2Q92802 583 aaPredicted RBP11.66□□□□□ -0.54
HPS4-212ENST00000481910 TADA1Q96BN2 335 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 SIPA1Q96FS4 1042 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 IFT43Q96FT9 208 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 PPP1R16AQ96I34 528 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 MRGPRX1Q96LB2 322 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 ERP44Q9BS26 406 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 TDRD1Q9BXT4 1180 aaKnown RBP11.66□□□□□ -0.54
HPS4-212ENST00000481910 RAB17Q9H0T7 212 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 SLC6A17Q9H1V8 727 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 SPATA6Q9NWH7 488 aaPredicted RBP11.66□□□□□ -0.54
HPS4-212ENST00000481910 CHKBQ9Y259 395 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 PCDHB9Q9Y5E1 797 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 ERI2A8K979 691 aaKnown RBP11.66□□□□□ -0.54
HPS4-212ENST00000481910 CHUKO15111 745 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 PSMD3O43242 534 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 ALDH1A2O94788 518 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 ADH1BP00325 375 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 DNTTP04053 509 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 PDHA1P08559 390 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 GABRG2P18507 467 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 C5AR1P21730 350 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 CCR3P51677 355 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 METAP1P53582 386 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 WNT3AP56704 352 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 RPS14P62263 151 aaKnown RBP11.66□□□□□ -0.54
HPS4-212ENST00000481910 CDK18Q07002 472 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 SPARCL1Q14515 664 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 SLC14A2Q15849 920 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 SEPT7Q16181 437 aaKnown RBP11.66□□□□□ -0.54
HPS4-212ENST00000481910 ARMC12Q5T9G4 340 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 ANO7Q6IWH7 933 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 KDELC1Q6UW63 502 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 BMP8AQ7Z5Y6 402 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 FBXL6Q8N531 539 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 B4GALNT2Q8NHY0 566 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 MRGPRX2Q96LB1 330 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 HHIPQ96QV1 700 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 DYRK4Q9NR20 520 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 TMCC3Q9ULS5 477 aa11.66□□□□□ -0.54
HPS4-212ENST00000481910 MID1O15344 667 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 HTRA2O43464 458 aaPredicted RBP11.65□□□□□ -0.54
HPS4-212ENST00000481910 HEXIM1O94992 359 aaKnown RBP11.65□□□□□ -0.54
HPS4-212ENST00000481910 PGLSO95336 258 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 AGTP01019 485 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 PRLP01236 227 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 FESP07332 822 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 ACADMP11310 421 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 NDUFV2P19404 249 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 IVDP26440 423 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 HNRNPH1P31943 449 aaKnown RBP11.65□□□□□ -0.54
HPS4-212ENST00000481910 EPHB1P54762 984 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 POLR2LP62875 67 aaKnown RBP11.65□□□□□ -0.54
HPS4-212ENST00000481910 WLSQ5T9L3 541 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 KCTD11Q693B1 232 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 BRAT1Q6PJG6 821 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 KIAA1324Q6UXG2 1013 aaKnown RBP11.65□□□□□ -0.54
HPS4-212ENST00000481910 TTC7BQ86TV6 843 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 GBP7Q8N8V2 638 aaPredicted RBP11.65□□□□□ -0.54
HPS4-212ENST00000481910 TMEM105Q8N8V8 129 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 UHMK1Q8TAS1 419 aaKnown RBP11.65□□□□□ -0.54
HPS4-212ENST00000481910 CPT1BQ92523 772 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 RMDN1Q96DB5 314 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 ECHDC3Q96DC8 303 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 SNF8Q96H20 258 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 FICDQ9BVA6 458 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 ADGRE3Q9BY15 652 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms