RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 DXOO77932 396 aaKnown RBP15.33■□□□□ 0.04
LIMS3-203ENST00000480744 SERPINC1P01008 464 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 PRKCIP41743 596 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 ZNF165P49910 485 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 ERVPABLB-1P60509 514 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 MTM1Q13496 603 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 SPIDRQ14159 915 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 RFTN1Q14699 578 aaPredicted RBP15.33■□□□□ 0.04
LIMS3-203ENST00000480744 SMTNL2Q2TAL5 461 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 BROXQ5VW32 411 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 GKN2Q86XP6 184 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 PSTKQ8IV42 348 aaKnown RBP15.33■□□□□ 0.04
LIMS3-203ENST00000480744 ARL10Q8N8L6 244 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 PLA2G15Q8NCC3 412 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 FNIP1Q8TF40 1166 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 KCNE4Q8WWG9 221 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 HSPH1Q92598 858 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 TRIM11Q96F44 468 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 NAP1L5Q96NT1 182 aaPredicted RBP15.33■□□□□ 0.04
LIMS3-203ENST00000480744 FUCA2Q9BTY2 467 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 ZWILCHQ9H900 591 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 MRPL47Q9HD33 250 aaKnown RBP15.33■□□□□ 0.04
LIMS3-203ENST00000480744 ASCL3Q9NQ33 180 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 UNC13CQ8NB66 2214 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 A0A1B0GTH6 734 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 TTC24A2A3L6 582 aaPredicted RBP15.32■□□□□ 0.04
LIMS3-203ENST00000480744 CACNB4O00305 520 aaPredicted RBP15.32■□□□□ 0.04
LIMS3-203ENST00000480744 KLK10O43240 276 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 TCEA3O75764 348 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 RECQL5O94762 991 aaPredicted RBP15.32■□□□□ 0.04
LIMS3-203ENST00000480744 TNFP01375 233 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 PRB1P04280 392 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 ARL4AP40617 200 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 RENBPP51606 427 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 ZNF135P52742 658 aaPredicted RBP15.32■□□□□ 0.04
LIMS3-203ENST00000480744 AP1S1P61966 158 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 POLR2LP62875 67 aaKnown RBP15.32■□□□□ 0.04
LIMS3-203ENST00000480744 SLC10A7Q0GE19 358 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 RALGDSQ12967 914 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 DPYSQ14117 519 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 ZNF235Q14590 738 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 LBRQ14739 615 aaKnown RBP15.32■□□□□ 0.04
LIMS3-203ENST00000480744 ACOX1Q15067 660 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 AGERQ15109 404 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 TDRD12Q587J7 1177 aaKnown RBP15.32■□□□□ 0.04
LIMS3-203ENST00000480744 TMCO4Q5TGY1 634 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 KCTD16Q68DU8 428 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 DPPA4Q7L190 304 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 WDR48Q8TAF3 677 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 SLC39A7Q92504 469 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 CCDC74AQ96AQ1 378 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 GRAMD1AQ96CP6 724 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 PDXPQ96GD0 296 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 HIC2Q96JB3 615 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 SEPT3Q9UH03 358 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 MOSPD1Q9UJG1 213 aa15.32■□□□□ 0.04
LIMS3-203ENST00000480744 ARHGEF17Q96PE2 2063 aaPredicted RBP15.32■□□□□ 0.04
LIMS3-203ENST00000480744 A0A1W2PNU3 283 aaPredicted RBP15.31■□□□□ 0.04
LIMS3-203ENST00000480744 PMS2P1A4D2B8 440 aa15.31■□□□□ 0.04
LIMS3-203ENST00000480744 ATXN7O15265 892 aaPredicted RBP15.31■□□□□ 0.04
LIMS3-203ENST00000480744 MYBL1P10243 752 aa15.31■□□□□ 0.04
LIMS3-203ENST00000480744 TCF4P15884 667 aa15.31■□□□□ 0.04
LIMS3-203ENST00000480744 AMPD1P23109 780 aa15.31■□□□□ 0.04
LIMS3-203ENST00000480744 HCAR3P49019 387 aa15.31■□□□□ 0.04
LIMS3-203ENST00000480744 TMPRSS3P57727 454 aa15.31■□□□□ 0.04
LIMS3-203ENST00000480744 NSUN2Q08J23 767 aaKnown RBP eCLIP15.31■□□□□ 0.04
LIMS3-203ENST00000480744 LVRNQ6Q4G3 990 aa15.31■□□□□ 0.04
LIMS3-203ENST00000480744 TMCO3Q6UWJ1 677 aa15.31■□□□□ 0.04
LIMS3-203ENST00000480744 LIPIQ6XZB0 460 aa15.31■□□□□ 0.04
LIMS3-203ENST00000480744 LZTR1Q8N653 840 aa15.31■□□□□ 0.04
LIMS3-203ENST00000480744 PDCD6IPQ8WUM4 868 aaKnown RBP15.31■□□□□ 0.04
LIMS3-203ENST00000480744 OR1E3Q8WZA6 343 aa15.31■□□□□ 0.04
LIMS3-203ENST00000480744 FUBP1Q96AE4 644 aaKnown RBP15.31■□□□□ 0.04
LIMS3-203ENST00000480744 ECHDC3Q96DC8 303 aa15.31■□□□□ 0.04
LIMS3-203ENST00000480744 PSKH2Q96QS6 385 aa15.31■□□□□ 0.04
LIMS3-203ENST00000480744 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.31■□□□□ 0.04
LIMS3-203ENST00000480744 CPNE5Q9HCH3 593 aa15.31■□□□□ 0.04
LIMS3-203ENST00000480744 EPB41L5Q9HCM4 733 aa15.31■□□□□ 0.04
LIMS3-203ENST00000480744 MRPL40Q9NQ50 206 aaKnown RBP15.31■□□□□ 0.04
LIMS3-203ENST00000480744 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.31■□□□□ 0.04
LIMS3-203ENST00000480744 B4GALT6Q9UBX8 382 aa15.31■□□□□ 0.04
LIMS3-203ENST00000480744 SMG1Q96Q15 3661 aaKnown RBP15.3■□□□□ 0.04
LIMS3-203ENST00000480744 TEX51A0A1B0GUA7 166 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.3■□□□□ 0.04
LIMS3-203ENST00000480744 CFAP69A5D8W1 941 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 TMEM202A6NGA9 273 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 TRAFD1O14545 582 aaPredicted RBP15.3■□□□□ 0.04
LIMS3-203ENST00000480744 RPLP0P05388 317 aaKnown RBP15.3■□□□□ 0.04
LIMS3-203ENST00000480744 KELP23276 732 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 IL1R2P27930 398 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 PCK1P35558 622 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 KIAA1024LP59773 190 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 DENND2CQ68D51 928 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 TAF8Q7Z7C8 310 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 SDR16C5Q8N3Y7 309 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 OR56A4Q8NGH8 313 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 WDR36Q8NI36 951 aaKnown RBP15.3■□□□□ 0.04
LIMS3-203ENST00000480744 NSMCE3Q96MG7 304 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 ZNF599Q96NL3 588 aa15.3■□□□□ 0.04
LIMS3-203ENST00000480744 SLC46A1Q96NT5 459 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms