RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 CAPN8A6NHC0 703 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 PRR5-ARHGAP8B1AHC4 643 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 ANKRD66B4E2M5 251 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 PMPCBO75439 489 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 MAOBP27338 520 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 PSMB4P28070 264 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 MAT2AP31153 395 aaKnown RBP19.82■□□□□ 0.76
LIME1-205ENST00000480139 CASQ1P31415 396 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 VIPR1P32241 457 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 PLA2G5P39877 138 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 WNT3AP56704 352 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 AGERQ15109 404 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 NAPEPLDQ6IQ20 393 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 CREG2Q8IUH2 290 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 LPCAT1Q8NF37 534 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 IFT43Q96FT9 208 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 LENG8Q96PV6 779 aaPredicted RBP19.82■□□□□ 0.76
LIME1-205ENST00000480139 SLC17A9Q9BYT1 436 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 B4GALT6Q9UBX8 382 aa19.82■□□□□ 0.76
LIME1-205ENST00000480139 RALGAPA1Q6GYQ0 2036 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 ATXN2Q99700 1313 aaKnown RBP19.81■□□□□ 0.76
LIME1-205ENST00000480139 ZFHX2Q9C0A1 2572 aaPredicted RBP19.81■□□□□ 0.76
LIME1-205ENST00000480139 DOCK9Q9BZ29 2069 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 A0A1B0GTW7 788 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 GOLGA6CA6NDK9 693 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 GOLGA6BA6NDN3 693 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 IGLON5A6NGN9 336 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 NPIPB15A6NHN6 443 aaPredicted RBP19.81■□□□□ 0.76
LIME1-205ENST00000480139 PRAMEF26H0Y7S4 382 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 PSMD11O00231 422 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 BCAT2O15382 392 aaPredicted RBP19.81■□□□□ 0.76
LIME1-205ENST00000480139 MMP20O60882 483 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 TM7SF2O76062 418 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 NDST3O95803 873 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 TUBB4AP04350 444 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 PRKCGP05129 697 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 GOLGA6DP0CG33 693 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 ACTN2P35609 894 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 LIG3P49916 1009 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 RACK1P63244 317 aaKnown RBP19.81■□□□□ 0.76
LIME1-205ENST00000480139 LMNB2Q03252 620 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 PCSK7Q16549 785 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 QPCTQ16769 361 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 DUOXA1Q1HG43 343 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 C4orf22Q6V702 233 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 SYT10Q6XYQ8 523 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 LIPIQ6XZB0 460 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 CCDC89Q8N998 374 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 DENND6BQ8NEG7 585 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 FAM122AQ96E09 287 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 MRGPRX2Q96LB1 330 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 WRAP53Q9BUR4 548 aaKnown RBP19.81■□□□□ 0.76
LIME1-205ENST00000480139 MLPHQ9BV36 600 aaPredicted RBP19.81■□□□□ 0.76
LIME1-205ENST00000480139 AP1M1Q9BXS5 423 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 MIR1-1HGQ9H1L0 117 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 TM9SF3Q9HD45 589 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 GOLGA6AQ9NYA3 693 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 SMARCAL1Q9NZC9 954 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 UBP1Q9NZI7 540 aa19.81■□□□□ 0.76
LIME1-205ENST00000480139 FOXD2O60548 495 aaPredicted RBP19.8■□□□□ 0.76
LIME1-205ENST00000480139 GFRA3O60609 400 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 PHF2O75151 1096 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 HEXIM1O94992 359 aaKnown RBP19.8■□□□□ 0.76
LIME1-205ENST00000480139 ELFN1P0C7U0 828 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 ZNF806P0C7X5 589 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 C6P13671 934 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 ZNF30P17039 623 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 HLA-DPA1P20036 260 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 HNRNPA2B1P22626 353 aaKnown RBP19.8■□□□□ 0.76
LIME1-205ENST00000480139 LHCGRP22888 699 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 HNF1BP35680 557 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 TNNT3P45378 269 aaPredicted RBP19.8■□□□□ 0.76
LIME1-205ENST00000480139 AFF3P51826 1226 aaKnown RBP19.8■□□□□ 0.76
LIME1-205ENST00000480139 SGCGQ13326 291 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 FGL2Q14314 439 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 CSRP2Q16527 193 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 CCDC70Q6NSX1 233 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 SLC23A3Q6PIS1 610 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 RAVER1Q8IY67 606 aaKnown RBP19.8■□□□□ 0.76
LIME1-205ENST00000480139 ZCCHC9Q8N567 271 aaKnown RBP19.8■□□□□ 0.76
LIME1-205ENST00000480139 GPR161Q8N6U8 529 aaKnown RBP19.8■□□□□ 0.76
LIME1-205ENST00000480139 TMEM145Q8NBT3 493 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 ATL2Q8NHH9 583 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 MAGOHBQ96A72 148 aaKnown RBP19.8■□□□□ 0.76
LIME1-205ENST00000480139 RMDN1Q96DB5 314 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 SERAC1Q96JX3 654 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 C16orf45Q96MC5 204 aaPredicted RBP19.8■□□□□ 0.76
LIME1-205ENST00000480139 SRPK1Q96SB4 655 aaKnown RBP19.8■□□□□ 0.76
LIME1-205ENST00000480139 C1QTNF7Q9BXJ2 289 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 PAK5Q9P286 719 aa19.8■□□□□ 0.76
LIME1-205ENST00000480139 GON4LQ3T8J9 2241 aa19.79■□□□□ 0.76
LIME1-205ENST00000480139 METTL18O95568 372 aa19.79■□□□□ 0.76
LIME1-205ENST00000480139 IFNB1P01574 187 aa19.79■□□□□ 0.76
LIME1-205ENST00000480139 ALPIP09923 528 aa19.79■□□□□ 0.76
LIME1-205ENST00000480139 ATXN1LP0C7T5 689 aaKnown RBP19.79■□□□□ 0.76
LIME1-205ENST00000480139 CTPS1P17812 591 aa19.79■□□□□ 0.76
LIME1-205ENST00000480139 AKT2P31751 481 aa19.79■□□□□ 0.76
LIME1-205ENST00000480139 ADRA1AP35348 466 aa19.79■□□□□ 0.76
LIME1-205ENST00000480139 FDFT1P37268 417 aa19.79■□□□□ 0.76
LIME1-205ENST00000480139 FNTAP49354 379 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms