RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 OR8D1Q8WZ84 308 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 PTPRN2Q92932 1015 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 ARHGEF2Q92974 986 aaKnown RBP4.99□□□□□ -1.61
PTCD3-213ENST00000480102 IGSF8Q969P0 613 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 FAF2Q96CS3 445 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 TBC1D31Q96DN5 1066 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 ARHGEF26Q96DR7 871 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 CCDC120Q96HB5 630 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 MCEEQ96PE7 176 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 PANX2Q96RD6 677 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 ACOX2Q99424 681 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 ZNF670Q9BS34 389 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 HDAC8Q9BY41 377 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 BTBD1Q9H0C5 482 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 BRD8Q9H0E9 1235 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.99□□□□□ -1.61
PTCD3-213ENST00000480102 LRRC19Q9H756 370 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 ERVMER34-1Q9H9K5 563 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 PREBQ9HCU5 417 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 ANLNQ9NQW6 1124 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 SEMA4GQ9NTN9 838 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 KCTD5Q9NXV2 234 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 PLK2Q9NYY3 685 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 SLAMF8Q9P0V8 285 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 IMPACTQ9P2X3 320 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 NCDNQ9UBB6 729 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 DKK3Q9UBP4 350 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 CNOT8Q9UFF9 292 aaKnown RBP4.99□□□□□ -1.61
PTCD3-213ENST00000480102 DUSP13Q9UII6 198 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 SLC25A13Q9UJS0 675 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 VPS28Q9UK41 221 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 VANGL2Q9ULK5 521 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 EFR3BQ9Y2G0 817 aa4.99□□□□□ -1.61
PTCD3-213ENST00000480102 PTPRZ1P23471 2315 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-213ENST00000480102 GREB1Q4ZG55 1949 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 A0A1B0GTW7 788 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 GOLGA6L7A0A1B0GV03 622 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 TSPAN11A1L157 253 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 LRRC72A6NJI9 287 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 AKR1B15C9JRZ8 316 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-213ENST00000480102 C1QTNF3-AMACRE9PGA6 284 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 GOLGA8SH3BPF8 625 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 CCP110O43303 1012 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 PLRG1O43660 514 aaKnown RBP4.98□□□□□ -1.61
PTCD3-213ENST00000480102 KDELR3O43731 214 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 PRPSAP2O60256 369 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 MAGEC1O60732 1142 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 ZNF821O75541 412 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-213ENST00000480102 GRAP2O75791 330 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 MOCS2O96007 188 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-213ENST00000480102 DNTTP04053 509 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 RHOCP08134 193 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 SYPP08247 313 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 KRT7P08729 469 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 ACADMP11310 421 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 CDK4P11802 303 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 SRCP12931 536 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 CSRP1P21291 193 aaKnown RBP4.98□□□□□ -1.61
PTCD3-213ENST00000480102 CD27P26842 260 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 OR1E1P30953 314 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 SERPINB6P35237 376 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 CCNFP41002 786 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 RNF4P78317 190 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 SLC25A11Q02978 314 aaKnown RBP4.98□□□□□ -1.61
PTCD3-213ENST00000480102 DMWDQ09019 674 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 SERINC3Q13530 473 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 DPYSQ14117 519 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 PDK2Q15119 407 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 CST6Q15828 149 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 SLC14A2Q15849 920 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 KCNMB1Q16558 191 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 ALFQ53S48 1182 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 TDRD12Q587J7 1177 aaKnown RBP4.98□□□□□ -1.61
PTCD3-213ENST00000480102 KIAA1211LQ6NV74 962 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 RFX8Q6ZV50 586 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 C14orf80Q86SX3 495 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 TMTC1Q8IUR5 882 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 MAP7D3Q8IWC1 876 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 SFTPA1Q8IWL2 248 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 TXLNBQ8N3L3 684 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 CARNMT1Q8N4J0 409 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 OXR1Q8N573 874 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 CCDC33Q8N5R6 958 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 EMC1Q8N766 993 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 POU5F2Q8N7G0 328 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 OR2A12Q8NGT7 310 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 OR2T34Q8NGX1 318 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 CTNNBL1Q8WYA6 563 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-213ENST00000480102 RFFLQ8WZ73 363 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 VOPP1Q96AW1 172 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 SKA1Q96BD8 255 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 ZNF653Q96CK0 615 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 MYEOVQ96EZ4 313 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 PPP1R16AQ96I34 528 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 TBATAQ96M53 351 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 CCDC42Q96M95 316 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 ZNF641Q96N77 438 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-213ENST00000480102 TSGA13Q96PP4 275 aa4.98□□□□□ -1.61
PTCD3-213ENST00000480102 LENG8Q96PV6 779 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-213ENST00000480102 PSKH2Q96QS6 385 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms