RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 TRPM4Q8TD43 1214 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 LRTOMTQ8WZ04 291 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 CENPIQ92674 756 aaPredicted RBP11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 CELF6Q96J87 481 aaKnown RBP11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 VPS35Q96QK1 796 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 MROQ9BYG7 248 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 EFCAB1Q9HAE3 211 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 C12orf10Q9HB07 376 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 ERAP1Q9NZ08 941 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 XPR1Q9UBH6 696 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 PRPF19Q9UMS4 504 aaKnown RBP11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 MYRFQ9Y2G1 1151 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 RAP2CQ9Y3L5 183 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 PHIPQ8WWQ0 1821 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 HACD1B0YJ81 288 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 ZNF701M0R085 212 aaPredicted RBP11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 SOCS7O14512 581 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 BEST1O76090 585 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 ALX3O95076 343 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 ERCC2P18074 760 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 MATKP42679 507 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 PLK1P53350 603 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 BCAT1P54687 386 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 SNX16P57768 344 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 ATP6V0D1P61421 351 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 CBLBQ13191 982 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 ZBED5Q49AG3 693 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 PERM1Q5SV97 790 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 DENND6AQ8IWF6 608 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 ANKRD52Q8NB46 1076 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 GALNT6Q8NCL4 622 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 SLC7A14Q8TBB6 771 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 C11orf84Q9BUA3 381 aaPredicted RBP11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 TDRD1Q9BXT4 1180 aaKnown RBP11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 FTHL17Q9BXU8 183 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 MRPL9Q9BYD2 267 aaKnown RBP11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 COQ10BQ9H8M1 238 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 CCDC167Q9P0B6 97 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 BCAP29Q9UHQ4 241 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 COPG1Q9Y678 874 aaKnown RBP11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 CTRB1P17538 263 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 NFKB1P19838 968 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 CD247P20963 164 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 CDH15P55291 814 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 POU5F1BQ06416 359 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 VGLL4Q14135 290 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 POU6F1Q14863 301 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 PITRM1Q5JRX3 1037 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 LIPMQ5VYY2 423 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 CTRB2Q6GPI1 263 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 PSTKQ8IV42 348 aaKnown RBP11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 ZNF641Q96N77 438 aaPredicted RBP11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 CIB1Q99828 191 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 HOXD1Q9GZZ0 328 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 TXNRD2Q9NNW7 524 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 PIGVQ9NUD9 493 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 SEPT3Q9UH03 358 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 GJD2Q9UKL4 321 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 NUP205Q92621 2012 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 C7orf72A4D263 438 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 JCHAINP01591 159 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 SBK3P0C264 359 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 PRKACAP17612 351 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 EPHX2P34913 555 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 SOX11P35716 441 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 MPP1Q00013 466 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 STK11Q15831 433 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 FGD3Q5JSP0 725 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 KRT80Q6KB66 452 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 TMEM135Q86UB9 458 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 DCP2Q8IU60 420 aaKnown RBP11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 PGAM4Q8N0Y7 254 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 ANGPTL6Q8NI99 470 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 NXNL1Q96CM4 212 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 RMDN1Q96DB5 314 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 ALPK1Q96QP1 1244 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 AIFM2Q9BRQ8 373 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 ATXN3LQ9H3M9 355 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 RPF2Q9H7B2 306 aaKnown RBP11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 COMMD8Q9NX08 183 aa11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 GMPR2Q9P2T1 348 aaKnown RBP11.11□□□□□ -0.63
LRRFIP1-211ENST00000478958 ARHGEF37A1IGU5 675 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 AP2A1O95782 977 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 MPOP05164 745 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 CKMT2P17540 419 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 TSPAN8P19075 237 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 CTBSQ01459 385 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 NAB1Q13506 487 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 NFE2Q16621 373 aaPredicted RBP11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 SLC25A52Q3SY17 297 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 GALNT18Q6P9A2 607 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 OTOP3Q7RTS5 596 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 CLEC14AQ86T13 490 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 GALNT13Q8IUC8 556 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 ZDHHC17Q8IUH5 632 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 NPWQ8N729 165 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 ADCY4Q8NFM4 1077 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 TNIP2Q8NFZ5 429 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 SPATA22Q8NHS9 363 aa11.1□□□□□ -0.63
LRRFIP1-211ENST00000478958 DPF3Q92784 378 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms