RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 ZNF605Q86T29 641 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 ARL14Q8N4G2 192 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 GPR156Q8NFN8 814 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 SCG3Q8WXD2 468 aaKnown RBP16.81■□□□□ 0.28
TRIM13-208ENST00000478111 PDXPQ96GD0 296 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 LIN37Q96GY3 246 aaPredicted RBP16.81■□□□□ 0.28
TRIM13-208ENST00000478111 WDR92Q96MX6 357 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 PEBP4Q96S96 227 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 KCTD15Q96SI1 283 aaPredicted RBP16.81■□□□□ 0.28
TRIM13-208ENST00000478111 RBM15Q96T37 977 aaKnown RBP eCLIP16.81■□□□□ 0.283e-6■■■■□ 20.5
TRIM13-208ENST00000478111 KLQ9UEF7 1012 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 GPR34Q9UPC5 381 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 DOLKQ9UPQ8 538 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 DGKBQ9Y6T7 804 aa16.81■□□□□ 0.28
TRIM13-208ENST00000478111 TLN1Q9Y490 2541 aaKnown RBP16.81■□□□□ 0.28
TRIM13-208ENST00000478111 TMEM202A6NGA9 273 aa16.8■□□□□ 0.28
TRIM13-208ENST00000478111 K7ENP7 123 aa16.8■□□□□ 0.28
TRIM13-208ENST00000478111 EEF2KO00418 725 aaKnown RBP16.8■□□□□ 0.28
TRIM13-208ENST00000478111 PCCBP05166 539 aa16.8■□□□□ 0.28
TRIM13-208ENST00000478111 ITGA2BP08514 1039 aa16.8■□□□□ 0.28
TRIM13-208ENST00000478111 ERMARDQ5T6L9 678 aa16.8■□□□□ 0.28
TRIM13-208ENST00000478111 INO80CQ6PI98 192 aaPredicted RBP16.8■□□□□ 0.28
TRIM13-208ENST00000478111 OGFOD3Q6PK18 319 aa16.8■□□□□ 0.28
TRIM13-208ENST00000478111 LIPIQ6XZB0 460 aa16.8■□□□□ 0.28
TRIM13-208ENST00000478111 ARHGAP36Q6ZRI8 547 aa16.8■□□□□ 0.28
TRIM13-208ENST00000478111 GKN2Q86XP6 184 aa16.8■□□□□ 0.28
TRIM13-208ENST00000478111 SFTPA2Q8IWL1 248 aa16.8■□□□□ 0.28
TRIM13-208ENST00000478111 PELI3Q8N2H9 469 aa16.8■□□□□ 0.28
TRIM13-208ENST00000478111 NPWQ8N729 165 aa16.8■□□□□ 0.28
TRIM13-208ENST00000478111 ANKRD20A12PQ8NF67 263 aa16.8■□□□□ 0.28
TRIM13-208ENST00000478111 OR1E3Q8WZA6 343 aa16.8■□□□□ 0.28
TRIM13-208ENST00000478111 CCDC97Q96F63 343 aaPredicted RBP16.8■□□□□ 0.28
TRIM13-208ENST00000478111 SNRNP25Q9BV90 132 aaKnown RBP16.8■□□□□ 0.28
TRIM13-208ENST00000478111 DHX35Q9H5Z1 703 aaKnown RBP16.8■□□□□ 0.28
TRIM13-208ENST00000478111 ANO10Q9NW15 660 aa16.8■□□□□ 0.28
TRIM13-208ENST00000478111 DONSONQ9NYP3 566 aa16.8■□□□□ 0.28
TRIM13-208ENST00000478111 ARHGAP42A6NI28 874 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 EIF3CLB5ME19 914 aaKnown RBP16.79■□□□□ 0.28
TRIM13-208ENST00000478111 D6RAR5 112 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 TRAFD1O14545 582 aaPredicted RBP16.79■□□□□ 0.28
TRIM13-208ENST00000478111 EFSO43281 561 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 ATMINO43313 823 aaPredicted RBP16.79■□□□□ 0.28
TRIM13-208ENST00000478111 PALMO75781 387 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 RECQL5O94762 991 aaPredicted RBP16.79■□□□□ 0.28
TRIM13-208ENST00000478111 TNFP01375 233 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 ATP1A3P13637 1013 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 ERCC2P18074 760 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 PSMA2P25787 234 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 SERPINA4P29622 427 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 TRIM23P36406 574 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 NSUN2Q08J23 767 aaKnown RBP eCLIP16.79■□□□□ 0.28
TRIM13-208ENST00000478111 LY6DQ14210 128 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 TP53INP2Q8IXH6 220 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 GFM1Q96RP9 751 aaKnown RBP16.79■□□□□ 0.28
TRIM13-208ENST00000478111 EIF3CQ99613 913 aaKnown RBP16.79■□□□□ 0.28
TRIM13-208ENST00000478111 TRIM7Q9C029 511 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 ATP13A3Q9H7F0 1226 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 SYNDIG1Q9H7V2 258 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 FGF22Q9HCT0 170 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 MRPL40Q9NQ50 206 aaKnown RBP16.79■□□□□ 0.28
TRIM13-208ENST00000478111 PARVAQ9NVD7 372 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 PCSK1NQ9UHG2 260 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 PCDHGA7Q9Y5G6 932 aa16.79■□□□□ 0.28
TRIM13-208ENST00000478111 TMEM191CA6NGB0 347 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 TMCO5BA8MYB1 307 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 PLD2O14939 933 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 TEX33O43247 280 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 NOBOXO60393 691 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 RPLP0P05388 317 aaKnown RBP16.78■□□□□ 0.28
TRIM13-208ENST00000478111 HOXC4P09017 264 aaPredicted RBP16.78■□□□□ 0.28
TRIM13-208ENST00000478111 CDK11BP21127 795 aaKnown RBP16.78■□□□□ 0.28
TRIM13-208ENST00000478111 TNFAIP3P21580 790 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 UGT1A5P35504 534 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 KIAA1024LP59773 190 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 CFAP58Q5T655 872 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 KIAA1614Q5VZ46 1190 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 SASS6Q6UVJ0 657 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 RFX8Q6ZV50 586 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 DPPA4Q7L190 304 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 RAB11FIP2Q7L804 512 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 FBXO39Q8N4B4 442 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 OR6C4Q8NGE1 309 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 OR56A4Q8NGH8 313 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 ATL2Q8NHH9 583 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 LGR4Q9BXB1 951 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 FOXP3Q9BZS1 431 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 LRRN3Q9H3W5 708 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 EPB41L5Q9HCM4 733 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 APPL1Q9UKG1 709 aa16.78■□□□□ 0.28
TRIM13-208ENST00000478111 CAPN8A6NHC0 703 aa16.77■□□□□ 0.28
TRIM13-208ENST00000478111 CCDC172P0C7W6 258 aa16.77■□□□□ 0.28
TRIM13-208ENST00000478111 HGFP14210 728 aa16.77■□□□□ 0.28
TRIM13-208ENST00000478111 MIPP30301 263 aa16.77■□□□□ 0.28
TRIM13-208ENST00000478111 SLC5A2P31639 672 aa16.77■□□□□ 0.28
TRIM13-208ENST00000478111 CCKBRP32239 447 aa16.77■□□□□ 0.28
TRIM13-208ENST00000478111 INHBCP55103 352 aa16.77■□□□□ 0.28
TRIM13-208ENST00000478111 BCL2L1Q07817 233 aa16.77■□□□□ 0.28
TRIM13-208ENST00000478111 IL10RBQ08334 325 aa16.77■□□□□ 0.28
TRIM13-208ENST00000478111 EIF3IQ13347 325 aaKnown RBP16.77■□□□□ 0.28
TRIM13-208ENST00000478111 STX1AQ16623 288 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms