RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.03□□□□□ -1.6
VPS50-214ENST00000477935 AGO2Q9UKV8 859 aaKnown RBP5.03□□□□□ -1.6
VPS50-214ENST00000477935 HS3ST3B1Q9Y662 390 aa5.03□□□□□ -1.6
VPS50-214ENST00000477935 A0A1B0GUL6 1792 aa5.03□□□□□ -1.6
VPS50-214ENST00000477935 TBC1D3DA0A087WVF3 549 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 TBC1D3IA0A087WXS9 549 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 TBC1D3EA0A087X179 549 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 TBC1D3KA0A087X1G2 549 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 TBC1D3BA6NDS4 549 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 TBC1D3FA6NER0 549 aaPredicted RBP5.02□□□□□ -1.61
VPS50-214ENST00000477935 TBC1D3LB9A6J9 549 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 F5H423 210 aaPredicted RBP5.02□□□□□ -1.61
VPS50-214ENST00000477935 ACKR2O00590 384 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 TLX3O43711 291 aaPredicted RBP5.02□□□□□ -1.61
VPS50-214ENST00000477935 PEX14O75381 377 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 CIAO1O76071 339 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 CXCL10P02778 98 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 ALDOCP09972 364 aaKnown RBP5.02□□□□□ -1.61
VPS50-214ENST00000477935 TBC1D3HP0C7X1 549 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 HYAL1Q12794 435 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 TWIST1Q15672 202 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 TBC1D3GQ6DHY5 549 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 TBC1D3CQ6IPX1 549 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 NFRKBQ6P4R8 1299 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 TLK2Q86UE8 772 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 TBC1D3Q8IZP1 549 aaPredicted RBP5.02□□□□□ -1.61
VPS50-214ENST00000477935 PAQR4Q8N4S7 273 aaPredicted RBP5.02□□□□□ -1.61
VPS50-214ENST00000477935 ZNF366Q8N895 744 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 EXD3Q8N9H8 876 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 SMRP1Q8NCR6 262 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 MPLKIPQ8TAP9 179 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 VCPIP1Q96JH7 1222 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 RPGRIP1Q96KN7 1286 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 RMDN3Q96TC7 470 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 RTP3Q9BQQ7 232 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 BICC1Q9H694 974 aaKnown RBP5.02□□□□□ -1.61
VPS50-214ENST00000477935 LIN7CQ9NUP9 197 aaKnown RBP5.02□□□□□ -1.61
VPS50-214ENST00000477935 DACT1Q9NYF0 836 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 RAI14Q9P0K7 980 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 LRFN1Q9P244 771 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 ZFYVE26Q68DK2 2539 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 EVPLQ92817 2033 aa5.02□□□□□ -1.61
VPS50-214ENST00000477935 FLT1P17948 1338 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 OTOGLQ3ZCN5 2332 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 CYP3A7-CYP3A51PA0A087WV96 503 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 FSD2A1L4K1 749 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 ASB14A6NK59 587 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 ZNF814B7Z6K7 855 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 VWA5AO00534 786 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 WDR46O15213 610 aaKnown RBP5.01□□□□□ -1.61
VPS50-214ENST00000477935 ACTL6BO94805 426 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 PDGFBP01127 241 aaPredicted RBP5.01□□□□□ -1.61
VPS50-214ENST00000477935 CYP3A7P24462 503 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 IL15P40933 162 aaPredicted RBP5.01□□□□□ -1.61
VPS50-214ENST00000477935 PNLIPRP1P54315 467 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 RRP1P56182 461 aaKnown RBP5.01□□□□□ -1.61
VPS50-214ENST00000477935 PSMC6P62333 389 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 AP2B1P63010 937 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 DEFB103AP81534 67 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 MVPQ14764 893 aaKnown RBP5.01□□□□□ -1.61
VPS50-214ENST00000477935 WDR43Q15061 677 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS50-214ENST00000477935 ANGPT1Q15389 498 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 SHROOM1Q2M3G4 852 aaPredicted RBP5.01□□□□□ -1.61
VPS50-214ENST00000477935 ZNF260Q3ZCT1 412 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 MIDNQ504T8 468 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 KIAA1755Q5JYT7 1200 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 ATPAF1Q5TC12 328 aaPredicted RBP5.01□□□□□ -1.61
VPS50-214ENST00000477935 AWAT2Q6E213 333 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 KLHL17Q6TDP4 642 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 LRIG3Q6UXM1 1119 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 ARMCX2Q7L311 632 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 CLEC4CQ8WTT0 213 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 MTG1Q9BT17 334 aaPredicted RBP5.01□□□□□ -1.61
VPS50-214ENST00000477935 TEX13BQ9BXU2 312 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 MFSD1Q9H3U5 465 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 MLXIPQ9HAP2 919 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 SEMA4BQ9NPR2 832 aaPredicted RBP5.01□□□□□ -1.61
VPS50-214ENST00000477935 PRDM8Q9NQV8 689 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 THSD1Q9NS62 852 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 POT1Q9NUX5 634 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 MSRB1Q9NZV6 116 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 FBXO40Q9UH90 709 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 RALYQ9UKM9 306 aaKnown RBP5.01□□□□□ -1.61
VPS50-214ENST00000477935 DAPP1Q9UN19 280 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 SLC8A2Q9UPR5 921 aa5.01□□□□□ -1.61
VPS50-214ENST00000477935 COPG1Q9Y678 874 aaKnown RBP5.01□□□□□ -1.61
VPS50-214ENST00000477935 TRIP12Q14669 1992 aaPredicted RBP5.01□□□□□ -1.61
VPS50-214ENST00000477935 ASH1LQ9NR48 2969 aaKnown RBP5.01□□□□□ -1.61
VPS50-214ENST00000477935 KMT2EQ8IZD2 1858 aa5□□□□□ -1.61
VPS50-214ENST00000477935 NAV2Q8IVL1 2488 aa5□□□□□ -1.61
VPS50-214ENST00000477935 A0A0G2JK05 382 aa5□□□□□ -1.61
VPS50-214ENST00000477935 KIR2DS5A0A0G2JLQ3 304 aa5□□□□□ -1.61
VPS50-214ENST00000477935 MBD3L5A6NJ08 208 aaPredicted RBP5□□□□□ -1.61
VPS50-214ENST00000477935 C5orf67F2Z3F1 127 aa5□□□□□ -1.61
VPS50-214ENST00000477935 KIR2DS3K7RE56 304 aa5□□□□□ -1.61
VPS50-214ENST00000477935 ATP2A1O14983 1001 aa5□□□□□ -1.61
VPS50-214ENST00000477935 PRPF4O43172 522 aaKnown RBP eCLIP5□□□□□ -1.61
VPS50-214ENST00000477935 TBX10O75333 385 aa5□□□□□ -1.61
VPS50-214ENST00000477935 CSTBP04080 98 aaKnown RBP5□□□□□ -1.61
VPS50-214ENST00000477935 WNT1P04628 370 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms