RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 ATPAF2Q8N5M1 289 aa9.89□□□□□ -0.83
NIFK-205ENST00000477693 TSEN2Q8NCE0 465 aaKnown RBP9.89□□□□□ -0.83
NIFK-205ENST00000477693 HCAR2Q8TDS4 363 aa9.89□□□□□ -0.83
NIFK-205ENST00000477693 NSMCE1Q8WV22 266 aa9.89□□□□□ -0.83
NIFK-205ENST00000477693 QKIQ96PU8 341 aaKnown RBP eCLIP9.89□□□□□ -0.83
NIFK-205ENST00000477693 PSKH2Q96QS6 385 aa9.89□□□□□ -0.83
NIFK-205ENST00000477693 TUBGCP5Q96RT8 1024 aa9.89□□□□□ -0.83
NIFK-205ENST00000477693 HERPUD2Q9BSE4 406 aa9.89□□□□□ -0.83
NIFK-205ENST00000477693 EDEM2Q9BV94 578 aa9.89□□□□□ -0.83
NIFK-205ENST00000477693 CINPQ9BW66 212 aaPredicted RBP9.89□□□□□ -0.83
NIFK-205ENST00000477693 FRMD8Q9BZ67 464 aaPredicted RBP9.89□□□□□ -0.83
NIFK-205ENST00000477693 FOXP3Q9BZS1 431 aa9.89□□□□□ -0.83
NIFK-205ENST00000477693 MIR1-1HGQ9H1L0 117 aa9.89□□□□□ -0.83
NIFK-205ENST00000477693 DLL3Q9NYJ7 618 aa9.89□□□□□ -0.83
NIFK-205ENST00000477693 SMARCAL1Q9NZC9 954 aa9.89□□□□□ -0.83
NIFK-205ENST00000477693 PAK5Q9P286 719 aa9.89□□□□□ -0.83
NIFK-205ENST00000477693 DKK3Q9UBP4 350 aa9.89□□□□□ -0.83
NIFK-205ENST00000477693 CDV3Q9UKY7 258 aaKnown RBP9.89□□□□□ -0.83
NIFK-205ENST00000477693 RAB21Q9UL25 225 aa9.89□□□□□ -0.83
NIFK-205ENST00000477693 SLC6A14Q9UN76 642 aa9.89□□□□□ -0.83
NIFK-205ENST00000477693 R3HDM2Q9Y2K5 976 aaKnown RBP9.89□□□□□ -0.83
NIFK-205ENST00000477693 C16orf96A6NNT2 1141 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 CDX4O14627 284 aaPredicted RBP9.88□□□□□ -0.83
NIFK-205ENST00000477693 MUSKO15146 869 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 RAD51CO43502 376 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 AP1G1O43747 822 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 OPHN1O60890 802 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 ERLIN1O75477 346 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 CFIP05156 583 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 PECAM1P16284 738 aaPredicted RBP9.88□□□□□ -0.83
NIFK-205ENST00000477693 ENGP17813 658 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 CES1P23141 567 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 HSPA9P38646 679 aaKnown RBP9.88□□□□□ -0.83
NIFK-205ENST00000477693 RGRP47804 291 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 GRIA4P48058 902 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 AFF3P51826 1226 aaKnown RBP9.88□□□□□ -0.83
NIFK-205ENST00000477693 RACK1P63244 317 aaKnown RBP9.88□□□□□ -0.83
NIFK-205ENST00000477693 CDK16Q00536 496 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 SLC10A7Q0GE19 358 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 CALCOCO2Q13137 446 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 SNX1Q13596 522 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 HNRNPDQ14103 355 aaKnown RBP9.88□□□□□ -0.83
NIFK-205ENST00000477693 LBRQ14739 615 aaKnown RBP9.88□□□□□ -0.83
NIFK-205ENST00000477693 BRD3Q15059 726 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 PRKD1Q15139 912 aaPredicted RBP9.88□□□□□ -0.83
NIFK-205ENST00000477693 RSPO4Q2I0M5 234 aaPredicted RBP9.88□□□□□ -0.83
NIFK-205ENST00000477693 ERCC6LQ2NKX8 1250 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 DUPD1Q68J44 220 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 TTC27Q6P3X3 843 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 FBXL19Q6PCT2 694 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 GDPD4Q6W3E5 623 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 BBS5Q8N3I7 341 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 CCNYQ8ND76 341 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 HTR3CQ8WXA8 447 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 RAB7BQ96AH8 199 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 PKNOX2Q96KN3 472 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 EXOC2Q96KP1 924 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 MGME1Q9BQP7 344 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 ZDHHC5Q9C0B5 715 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 EBF2Q9HAK2 575 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 USP29Q9HBJ7 922 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 TM9SF3Q9HD45 589 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 GDF3Q9NR23 364 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 ARGLU1Q9NWB6 273 aaPredicted RBP9.88□□□□□ -0.83
NIFK-205ENST00000477693 WHRNQ9P202 907 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 SEPT3Q9UH03 358 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 DMTF1Q9Y222 760 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 NEU2Q9Y3R4 380 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 SLCO1B1Q9Y6L6 691 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 PCDH15Q96QU1 1955 aa9.88□□□□□ -0.83
NIFK-205ENST00000477693 BAHCC1Q9P281 2608 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 RALGAPA1Q6GYQ0 2036 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 TSPAN11A1L157 253 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 GOLGA6CA6NDK9 693 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 GOLGA6BA6NDN3 693 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 AP3B1O00203 1094 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 SLC30A4O14863 429 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 AREL1O15033 823 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 MATN3O15232 486 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 INSIG1O15503 277 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 TTI1O43156 1089 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 PSMD3O43242 534 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 HEXIM1O94992 359 aaKnown RBP9.87□□□□□ -0.83
NIFK-205ENST00000477693 KRT14P02533 472 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 SYPP08247 313 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 GOLGA6DP0CG33 693 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 ADCY8P40145 1251 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 MMP13P45452 471 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 MAPK8P45983 427 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 AP1S1P61966 158 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 IFI35P80217 286 aaPredicted RBP9.87□□□□□ -0.83
NIFK-205ENST00000477693 SLC10A2Q12908 348 aaPredicted RBP9.87□□□□□ -0.83
NIFK-205ENST00000477693 ZNF235Q14590 738 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 NUMA1Q14980 2115 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 LLGL1Q15334 1064 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 PROX2Q3B8N5 592 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 TMEM259Q4ZIN3 620 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 SETMARQ53H47 684 aaPredicted RBP9.87□□□□□ -0.83
NIFK-205ENST00000477693 STPG1Q5TH74 334 aa9.87□□□□□ -0.83
NIFK-205ENST00000477693 ARMC3Q5W041 872 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms