RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 TRIM31Q9BZY9 425 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 PDE11AQ9HCR9 933 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 RASSF1Q9NS23 344 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 ZDHHC7Q9NXF8 308 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 MORC2Q9Y6X9 1032 aaPredicted RBP4.32□□□□□ -1.72
UBR3-209ENST00000477461 UBR2Q8IWV8 1755 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 PAPPAQ13219 1627 aa4.32□□□□□ -1.72
UBR3-209ENST00000477461 HEG1Q9ULI3 1381 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 PLSCR5A0PG75 271 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 SRRM3A6NNA2 597 aaPredicted RBP4.31□□□□□ -1.72
UBR3-209ENST00000477461 GRM8O00222 908 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 ASAP2O43150 1006 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 IRAK2O43187 625 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 PIP5K1CO60331 668 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 HEXIM1O94992 359 aaKnown RBP4.31□□□□□ -1.72
UBR3-209ENST00000477461 STARD3NLO95772 234 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 TK1P04183 234 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 HOXB7P09629 217 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 HSD3B1P14060 373 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 TYK2P29597 1187 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 PCP4P48539 62 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 CDH12P55289 794 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 RPS6KA2Q15349 733 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 ZNF718Q3SXZ3 478 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 CCDC30Q5VVM6 783 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 ATG9BQ674R7 924 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 ENDOVQ8N8Q3 282 aaKnown RBP4.31□□□□□ -1.72
UBR3-209ENST00000477461 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.31□□□□□ -1.72
UBR3-209ENST00000477461 C3orf49Q96BT1 292 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 TBC1D20Q96BZ9 403 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 PIGSQ96S52 555 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 KLHL31Q9H511 634 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 Q9N2J8 555 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 SLC22A11Q9NSA0 550 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 SMC4Q9NTJ3 1288 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 TMEM248Q9NWD8 314 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 ERRFI1Q9UJM3 462 aaPredicted RBP4.31□□□□□ -1.72
UBR3-209ENST00000477461 BAG5Q9UL15 447 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 LAMB4A4D0S4 1761 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 WDR81Q562E7 1941 aa4.31□□□□□ -1.72
UBR3-209ENST00000477461 KIF16BQ96L93 1317 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 C5P01031 1676 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 A0A0A0MQY5 61 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 HMX3A6NHT5 357 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 HSPB6O14558 160 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 TCERG1O14776 1098 aaKnown RBP4.3□□□□□ -1.72
UBR3-209ENST00000477461 IPO8O15397 1037 aaKnown RBP4.3□□□□□ -1.72
UBR3-209ENST00000477461 SEPT4O43236 478 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 CYP21A2P08686 494 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 FCGR2AP12318 317 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 LYL1P12980 280 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 UNGP13051 313 aaPredicted RBP4.3□□□□□ -1.72
UBR3-209ENST00000477461 NAGAP17050 411 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 GSTM2P28161 218 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 NUDT6P53370 316 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 SEC61A1P61619 476 aaKnown RBP4.3□□□□□ -1.72
UBR3-209ENST00000477461 CDK18Q07002 472 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 PPFIA1Q13136 1202 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 PKP1Q13835 747 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 KRT24Q2M2I5 525 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 ALDH1L2Q3SY69 923 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 C5orf22Q49AR2 442 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 SYTL3Q4VX76 610 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 RETSATQ6NUM9 610 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 LDHAL6AQ6ZMR3 332 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 MOGAT3Q86VF5 341 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 TSPYL6Q8N831 410 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 SLC35F5Q8WV83 523 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 INPP4AQ96PE3 977 aaPredicted RBP4.3□□□□□ -1.72
UBR3-209ENST00000477461 FIZ1Q96SL8 496 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 TAF1DQ9H5J8 278 aaPredicted RBP4.3□□□□□ -1.72
UBR3-209ENST00000477461 ACAD9Q9H845 621 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 PPCSQ9HAB8 311 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 DBF4Q9UBU7 674 aaPredicted RBP4.3□□□□□ -1.72
UBR3-209ENST00000477461 KCPQ6ZWJ8 1503 aa4.3□□□□□ -1.72
UBR3-209ENST00000477461 LY75O60449 1722 aa4.29□□□□□ -1.72
UBR3-209ENST00000477461 TNS1Q9HBL0 1735 aaKnown RBP4.29□□□□□ -1.72
UBR3-209ENST00000477461 LINC01553A4QN01 128 aa4.29□□□□□ -1.72
UBR3-209ENST00000477461 DDTLA6NHG4 134 aaPredicted RBP4.29□□□□□ -1.72
UBR3-209ENST00000477461 E7EVH7 732 aa4.29□□□□□ -1.72
UBR3-209ENST00000477461 ITM2AO43736 263 aa4.29□□□□□ -1.72
UBR3-209ENST00000477461 KCNJ13O60928 360 aa4.29□□□□□ -1.72
UBR3-209ENST00000477461 SOCS5O75159 536 aa4.29□□□□□ -1.72
UBR3-209ENST00000477461 PLGP00747 810 aaPredicted RBP4.29□□□□□ -1.72
UBR3-209ENST00000477461 RFC1P35251 1148 aaPredicted RBP4.29□□□□□ -1.72
UBR3-209ENST00000477461 AARSP49588 968 aaKnown RBP eCLIP4.29□□□□□ -1.72
UBR3-209ENST00000477461 RARSP54136 660 aaKnown RBP4.29□□□□□ -1.72
UBR3-209ENST00000477461 PRKAA2P54646 552 aa4.29□□□□□ -1.72
UBR3-209ENST00000477461 ACTR2P61160 394 aa4.29□□□□□ -1.72
UBR3-209ENST00000477461 TRAF2Q12933 501 aa4.29□□□□□ -1.72
UBR3-209ENST00000477461 ZRSR2Q15696 482 aaKnown RBP4.29□□□□□ -1.72
UBR3-209ENST00000477461 HLFQ16534 295 aa4.29□□□□□ -1.72
UBR3-209ENST00000477461 ADCK5Q3MIX3 580 aa4.29□□□□□ -1.72
UBR3-209ENST00000477461 LRRC24Q50LG9 513 aa4.29□□□□□ -1.72
UBR3-209ENST00000477461 FBXO47Q5MNV8 452 aa4.29□□□□□ -1.72
UBR3-209ENST00000477461 OTUD3Q5T2D3 398 aaPredicted RBP4.29□□□□□ -1.72
UBR3-209ENST00000477461 VWA5B1Q5TIE3 1220 aa4.29□□□□□ -1.72
UBR3-209ENST00000477461 SYNE3Q6ZMZ3 975 aa4.29□□□□□ -1.72
UBR3-209ENST00000477461 HERC6Q8IVU3 1022 aa4.29□□□□□ -1.72
UBR3-209ENST00000477461 ANKRD42Q8N9B4 389 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms