RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 RETSATQ6NUM9 610 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 AGMOQ6ZNB7 445 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 DET1Q7L5Y6 550 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 OR13C4Q8NGS5 318 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 FIG4Q92562 907 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 SLC7A6OSQ96CW6 309 aaPredicted RBP11.08□□□□□ -0.64
COL27A1-204ENST00000477421 BTN2A3PQ96KV6 586 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 ASB8Q9H765 288 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 CYLDQ9NQC7 956 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 AP4S1Q9Y587 144 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 SNX5Q9Y5X3 404 aa11.08□□□□□ -0.64
COL27A1-204ENST00000477421 SEPT4O43236 478 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 CNTN5O94779 1100 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 HSPA1AP0DMV8 641 aaKnown RBP11.07□□□□□ -0.64
COL27A1-204ENST00000477421 HSPA1BP0DMV9 641 aaKnown RBP11.07□□□□□ -0.64
COL27A1-204ENST00000477421 CCNG1P51959 295 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 INHBEP58166 350 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 PGS1Q32NB8 556 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 AARS2Q5JTZ9 985 aaKnown RBP11.07□□□□□ -0.64
COL27A1-204ENST00000477421 MARCH8Q5T0T0 291 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 FRMD7Q6ZUT3 714 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 ZNF280BQ86YH2 543 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 RTL3Q8N8U3 475 aaKnown RBP11.07□□□□□ -0.64
COL27A1-204ENST00000477421 KLQ9UEF7 1012 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 AGO1Q9UL18 857 aaKnown RBP11.07□□□□□ -0.64
COL27A1-204ENST00000477421 PPM1HQ9ULR3 514 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 PCDHGB4Q9UN71 923 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 ARL5AQ9Y689 179 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 LAMB1P07942 1786 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 ALBP02768 609 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 SLC18A1P54219 525 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 EPHB3P54753 998 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 TIGD2Q4W5G0 525 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 FAM151BQ6UXP7 276 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 ADCK2Q7Z695 626 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 C14orf80Q86SX3 495 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 RP9Q8TA86 221 aaKnown RBP11.07□□□□□ -0.64
COL27A1-204ENST00000477421 GRIN3AQ8TCU5 1115 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 KCTD14Q9BQ13 255 aaPredicted RBP11.07□□□□□ -0.64
COL27A1-204ENST00000477421 MLPHQ9BV36 600 aaPredicted RBP11.07□□□□□ -0.64
COL27A1-204ENST00000477421 ARHGAP39Q9C0H5 1083 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 HPS4Q9NQG7 708 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 KIF17Q9P2E2 1029 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 POMPQ9Y244 141 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 ABCA3Q99758 1704 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 ABLIM1O14639 778 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 TBL1XO60907 577 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 C1RP00736 705 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 HALP42357 657 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 STXBP5Q5T5C0 1151 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 NAPRTQ6XQN6 538 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
COL27A1-204ENST00000477421 PIM3Q86V86 326 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 FBXW8Q8N3Y1 598 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 SCLYQ96I15 445 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 DCUN1D5Q9BTE7 237 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 PRKAG3Q9UGI9 489 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 EVPLQ92817 2033 aa11.07□□□□□ -0.64
COL27A1-204ENST00000477421 C1orf232A0A0U1RR37 186 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 TMEM114B3SHH9 223 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 ZNF197O14709 1029 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 SEC22BO75396 215 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 LBPP18428 481 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 IGFBP6P24592 240 aaPredicted RBP11.06□□□□□ -0.64
COL27A1-204ENST00000477421 ACVRL1P37023 503 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 GSSP48637 474 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 KCNQ1P51787 676 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 NRG1Q02297 640 aaPredicted RBP11.06□□□□□ -0.64
COL27A1-204ENST00000477421 TRIM32Q13049 653 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 PCLAFQ15004 111 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 TTLL9Q3SXZ7 439 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 VPS26BQ4G0F5 336 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 ARMC12Q5T9G4 340 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 UGT3A1Q6NUS8 523 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 SLC44A2Q8IWA5 706 aaPredicted RBP11.06□□□□□ -0.64
COL27A1-204ENST00000477421 FBXO27Q8NI29 283 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 OLIG1Q8TAK6 271 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 GFM2Q969S9 779 aaKnown RBP11.06□□□□□ -0.64
COL27A1-204ENST00000477421 ZNF570Q96NI8 536 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 SLC39A3Q9BRY0 314 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 ASPSCR1Q9BZE9 553 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 CCSER2Q9H7U1 834 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 S100A14Q9HCY8 104 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 FAM149AA5PLN7 773 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 CCDC154A6NI56 674 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 UBXN8O00124 270 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 ZBTB14O43829 449 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 RPLP2P05387 115 aaKnown RBP11.06□□□□□ -0.64
COL27A1-204ENST00000477421 ITGB1P05556 798 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 MC4RP32245 332 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 KPNA1P52294 538 aaPredicted RBP11.06□□□□□ -0.64
COL27A1-204ENST00000477421 PRKAA2P54646 552 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 BCL2L1Q07817 233 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 TRAF2Q12933 501 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 AASDHQ4L235 1098 aaPredicted RBP11.06□□□□□ -0.64
COL27A1-204ENST00000477421 SAMD4BQ5PRF9 694 aaKnown RBP11.06□□□□□ -0.64
COL27A1-204ENST00000477421 LDLRAD1Q5T700 205 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 FBXL22Q6P050 247 aa11.06□□□□□ -0.64
COL27A1-204ENST00000477421 ZC3HC1Q86WB0 502 aaKnown RBP11.06□□□□□ -0.64
COL27A1-204ENST00000477421 NTAN1Q96AB6 310 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 429 ms