RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 HMGCLL1Q8TB92 370 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 HOPXQ9BPY8 73 aaPredicted RBP15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 MTG1Q9BT17 334 aaPredicted RBP15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 TPK1Q9H3S4 243 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 INTS10Q9NVR2 710 aaKnown RBP15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 ACTR3BQ9P1U1 418 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 KLHL3Q9UH77 587 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 VANGL2Q9ULK5 521 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 SNX9Q9Y5X1 595 aa15.34■□□□□ 0.05
CLSTN1-205ENST00000477264 SPTLC1O15269 473 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 HBP1O60381 514 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 ABCB7O75027 752 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 LGALS2P05162 132 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 NFKBIAP25963 317 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 SCNN1AP37088 669 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 CCR10P46092 362 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 APLP1P51693 650 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 INCA1Q0VD86 236 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 TFAP2DQ7Z6R9 452 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 ZBTB8OSQ8IWT0 167 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 SPPL2BQ8TCT7 592 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 LRRN4Q8WUT4 740 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 SH3YL1Q96HL8 342 aaPredicted RBP15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 PIWIL1Q96J94 861 aaKnown RBP15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 NSMCE3Q96MG7 304 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 HEXIM2Q96MH2 286 aaKnown RBP15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 GLT1D1Q96MS3 346 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 KCTD15Q96SI1 283 aaPredicted RBP15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 EML4Q9HC35 981 aaKnown RBP15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 FLRT1Q9NZU1 646 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 ANKMY1Q9P2S6 941 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 HMGXB4Q9UGU5 601 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 GJD2Q9UKL4 321 aa15.33■□□□□ 0.04
CLSTN1-205ENST00000477264 AP3B1O00203 1094 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 GAS2O43903 313 aaKnown RBP15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 DLX3O60479 287 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 MAFO75444 373 aaPredicted RBP15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 NTRK1P04629 796 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 PRKCBP05771 671 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 UGT2B4P06133 528 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 KRT19P08727 400 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 MATN1P21941 496 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 HPCAL1P37235 193 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 RPS9P46781 194 aaKnown RBP15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 CDH8P55286 799 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 CCL14Q16627 93 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 UGP2Q16851 508 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 RBM48Q5RL73 367 aaKnown RBP15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 PRAMEF19Q5SWL8 479 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 MPZL3Q6UWV2 235 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 ANKRD13BQ86YJ7 626 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 ABHD11Q8NFV4 315 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 UBA3Q8TBC4 463 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 PTCD2Q8WV60 388 aaKnown RBP15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 CCDC126Q96EE4 140 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 FBXL20Q96IG2 436 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 C2orf40Q9H1Z8 148 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 RMND5AQ9H871 391 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 CASS4Q9NQ75 786 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 SLC39A10Q9ULF5 831 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 AURKCQ9UQB9 309 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 USP3Q9Y6I4 520 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 LSM1O15116 133 aaKnown RBP15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 GRAP2O75791 330 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 AP2A1O95782 977 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 DNAJB2P25686 324 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 GSTM2P28161 218 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 STX1BP61266 288 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 ADARB1P78563 741 aaKnown RBP15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 FOXM1Q08050 763 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 CBX2Q14781 532 aaPredicted RBP15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 KCNJ8Q15842 424 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 CYBRD1Q53TN4 286 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 CES3Q6UWW8 571 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 SLC26A9Q7LBE3 791 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 PSTKQ8IV42 348 aaKnown RBP15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 CADM3Q8N126 398 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 FSTL5Q8N475 847 aaPredicted RBP15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 TRPV3Q8NET8 790 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 SNX19Q92543 992 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 CENPIQ92674 756 aaPredicted RBP15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 P2RY11Q96G91 374 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 VMP1Q96GC9 406 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 MUC3BQ9H195 1237 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 MRPL46Q9H2W6 279 aaKnown RBP15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 FANCEQ9HB96 536 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 MOV10Q9HCE1 1003 aaKnown RBP15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 AKIP1Q9NQ31 210 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 GTSE1Q9NYZ3 720 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 SIX4Q9UIU6 781 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 TSPAN16Q9UKR8 245 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 OAZ3Q9UMX2 235 aa15.32■□□□□ 0.04
CLSTN1-205ENST00000477264 TTC24A2A3L6 582 aaPredicted RBP15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 ACOX3O15254 700 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 GPC4O75487 556 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 RSL1D1O76021 490 aaKnown RBP15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 UMPSP11172 480 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 IDUAP35475 653 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 OPRL1P41146 370 aa15.31■□□□□ 0.04
CLSTN1-205ENST00000477264 NPY2RP49146 381 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms