RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 MRPS7Q9Y2R9 242 aaKnown RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 UBE2J1Q9Y385 318 aaPredicted RBP2.94□□□□□ -1.94
HMGN4-202ENST00000477243 SNX9Q9Y5X1 595 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 LIPGQ9Y5X9 500 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 CABIN1Q9Y6J0 2220 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 SAMD9LQ8IVG5 1584 aa2.94□□□□□ -1.94
HMGN4-202ENST00000477243 ACEP12821 1306 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 WDR19Q8NEZ3 1342 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 EEA1Q15075 1411 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 RGPD3A6NKT7 1758 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 RGPD4Q7Z3J3 1758 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ERVK-7P63135 1459 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 C1orf167Q5SNV9 1468 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 LOC105369274A0A096LPK9 316 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 LOC102723532A0A0G2JNH3 316 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 XKRY2A2RUG3 117 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 DENND3A2RUS2 1198 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ZSCAN5CA6NGD5 496 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SDR42E2A6NKP2 422 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ZNF839A8K0R7 811 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 E9PBE3 544 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 KIF2AO00139 706 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 E2F3O00716 465 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 KIAA0391O15091 583 aaKnown RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 DYNC1LI2O43237 492 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SHOX2O60902 331 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 MITFO75030 526 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 LEFTY1O75610 366 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 AKAP3O75969 853 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ALDH1A2O94788 518 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 HEXIM1O94992 359 aaKnown RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 AKR7A3O95154 331 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 YEATS4O95619 227 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 DIRAS3O95661 229 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 CYBBP04839 570 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ENO1P06733 434 aaKnown RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 CHRM4P08173 479 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SRPRAP08240 638 aaKnown RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 MMP2P08253 660 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 CYC1P08574 325 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SBK3P0C264 359 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ATXN1LP0C7T5 689 aaKnown RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 RAP2AP10114 183 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 THRBP10828 461 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 IRF1P10914 325 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ACP5P13686 325 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 AREGP15514 252 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 FPR1P21462 350 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 FDXRP22570 491 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 RPA1P27694 616 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 PSMA5P28066 241 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 MC5RP33032 325 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 HNF1BP35680 557 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 USP8P40818 1118 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 PRKCIP41743 596 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 GABRB2P47870 512 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 FASLGP48023 281 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 GCLCP48506 637 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 CENPAP49450 140 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 CAMPP49913 170 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ATP5IP56385 69 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 NME5P56597 212 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ANTXR2P58335 489 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 TGFB2P61812 414 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 TRA2BP62995 288 aaKnown RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 TFAP4Q01664 338 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 GFPT1Q06210 699 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 EGR3Q06889 387 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SLC20A2Q08357 652 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 NFIAQ12857 509 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 TCF15Q12870 199 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ABRQ12979 859 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 OLIG2Q13516 323 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 KCNC3Q14003 757 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 IL11RAQ14626 422 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 RAB3GAP1Q15042 981 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 RRS1Q15050 365 aaKnown RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 DPYSL2Q16555 572 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SGCBQ16585 318 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 TAZQ16635 292 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 FASTKD1Q53R41 847 aaKnown RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 AADACL4Q5VUY2 407 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 PLA2G4FQ68DD2 849 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SLC9A4Q6AI14 798 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 TMEM81Q6P7N7 255 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 GALNT18Q6P9A2 607 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 LAYNQ6UX15 382 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ISLR2Q6UXK2 745 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 LIPIQ6XZB0 460 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 C8orf86Q6ZUL3 223 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ARHGAP27Q6ZUM4 889 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 TOM1L2Q6ZVM7 507 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 BNIPLQ7Z465 357 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 KCTD20Q7Z5Y7 419 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SPATA2LQ8IUW3 424 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 DENND6AQ8IWF6 608 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 DDIASQ8IXT1 998 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 CFAP206Q8IYR0 622 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 HACE1Q8IYU2 909 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SCYL3Q8IZE3 742 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms