RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 SKA1Q96BD8 255 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 SPATA17Q96L03 361 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 TMEM175Q9BSA9 504 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 ZBED2Q9BTP6 218 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 CFHR5Q9BXR6 569 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 VCXQ9H320 206 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 PSMD3O43242 534 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 SNNO75324 88 aaPredicted RBP13.46□□□□□ -0.25
HDAC7-221ENST00000477203 CCDC166P0CW27 439 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 CTPS1P17812 591 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 PAMP19021 973 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 HOXD9P28356 352 aaPredicted RBP13.46□□□□□ -0.25
HDAC7-221ENST00000477203 PTDSS1P48651 473 aaKnown RBP13.46□□□□□ -0.25
HDAC7-221ENST00000477203 CDK18Q07002 472 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 VEPH1Q14D04 833 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 TSNAXIP1Q2TAA8 658 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 HEXDCQ8WVB3 486 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 C7orf26Q96N11 449 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 GPR22Q99680 433 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 NUF2Q9BZD4 464 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.46□□□□□ -0.25
HDAC7-221ENST00000477203 UBA2Q9UBT2 640 aaPredicted RBP13.46□□□□□ -0.25
HDAC7-221ENST00000477203 SCOCQ9UIL1 159 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 FAM50BQ9Y247 325 aa13.46□□□□□ -0.25
HDAC7-221ENST00000477203 ANKRD36A6QL64 1941 aa13.46□□□□□ -0.26
HDAC7-221ENST00000477203 IGLV3-10A0A075B6K4 115 aa13.46□□□□□ -0.26
HDAC7-221ENST00000477203 HEATR9A2RTY3 570 aa13.46□□□□□ -0.26
HDAC7-221ENST00000477203 CACNG3O60359 315 aa13.46□□□□□ -0.26
HDAC7-221ENST00000477203 GABRR2P28476 465 aa13.46□□□□□ -0.26
HDAC7-221ENST00000477203 MYBPC3Q14896 1274 aa13.46□□□□□ -0.26
HDAC7-221ENST00000477203 TMCO4Q5TGY1 634 aa13.46□□□□□ -0.26
HDAC7-221ENST00000477203 SLC22A17Q8WUG5 538 aa13.46□□□□□ -0.26
HDAC7-221ENST00000477203 NSL1Q96IY1 281 aa13.46□□□□□ -0.26
HDAC7-221ENST00000477203 RPL10LQ96L21 214 aaKnown RBP13.46□□□□□ -0.26
HDAC7-221ENST00000477203 GBP5Q96PP8 586 aa13.46□□□□□ -0.26
HDAC7-221ENST00000477203 WWP1Q9H0M0 922 aa13.46□□□□□ -0.26
HDAC7-221ENST00000477203 TLE6Q9H808 572 aa13.46□□□□□ -0.26
HDAC7-221ENST00000477203 GPAMQ9HCL2 828 aa13.46□□□□□ -0.26
HDAC7-221ENST00000477203 AFF4Q9UHB7 1163 aaKnown RBP13.46□□□□□ -0.26
HDAC7-221ENST00000477203 VPS28Q9UK41 221 aa13.46□□□□□ -0.26
HDAC7-221ENST00000477203 SPO11Q9Y5K1 396 aa13.46□□□□□ -0.26
HDAC7-221ENST00000477203 CPQQ9Y646 472 aa13.46□□□□□ -0.26
HDAC7-221ENST00000477203 TRIM43BA6NCK2 446 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 PRAMEF11O60813 436 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 CAPN15O75808 1086 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 PIGNO95427 931 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 IGLV3-27P01718 113 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 SOD2P04179 222 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 JUNP05412 331 aaKnown RBP13.45□□□□□ -0.26
HDAC7-221ENST00000477203 SERPINF2P08697 491 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 CLTBP09497 229 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 ZDHHC11BP0C7U3 371 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 ATP6V1C1P21283 382 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 EPHA3P29320 983 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 GSTT1P30711 240 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 RAB10P61026 200 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 IL10RBQ08334 325 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 SLC9B1Q4ZJI4 515 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 GPR158Q5T848 1215 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 ZNF697Q5TEC3 545 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 FAM13CQ8NE31 585 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 ANKRD49Q8WVL7 239 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 ABTB1Q969K4 478 aaPredicted RBP13.45□□□□□ -0.26
HDAC7-221ENST00000477203 TOP1MTQ969P6 601 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 TRIM43Q96BQ3 446 aaPredicted RBP13.45□□□□□ -0.26
HDAC7-221ENST00000477203 ERLEC1Q96DZ1 483 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 A0A1W2PRU2 124 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 CCDC162PA2VCL2 907 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 BIRC5O15392 142 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 DCXO43602 365 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 TRIM13O60858 407 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 IMPDH2P12268 514 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 MYL4P12829 197 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 KCNA5P22460 613 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 PMLP29590 882 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 ARL13AQ5H913 290 aaPredicted RBP13.45□□□□□ -0.26
HDAC7-221ENST00000477203 LRRC8EQ6NSJ5 796 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 TMC7Q7Z402 723 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 DTX3LQ8TDB6 740 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 DDI1Q8WTU0 396 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 SNRNP27Q8WVK2 155 aaKnown RBP13.45□□□□□ -0.26
HDAC7-221ENST00000477203 CADM1Q9BY67 442 aaKnown RBP13.45□□□□□ -0.26
HDAC7-221ENST00000477203 SARS2Q9NP81 518 aaKnown RBP13.45□□□□□ -0.26
HDAC7-221ENST00000477203 TREX1Q9NSU2 369 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 GTSE1Q9NYZ3 720 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 APOBEC2Q9Y235 224 aaKnown RBP13.45□□□□□ -0.26
HDAC7-221ENST00000477203 PCDHGA4Q9Y5G9 962 aa13.45□□□□□ -0.26
HDAC7-221ENST00000477203 DRGXA6NNA5 263 aa13.44□□□□□ -0.26
HDAC7-221ENST00000477203 GOT2P00505 430 aaKnown RBP13.44□□□□□ -0.26
HDAC7-221ENST00000477203 CXCL10P02778 98 aa13.44□□□□□ -0.26
HDAC7-221ENST00000477203 ATXN1LP0C7T5 689 aaKnown RBP13.44□□□□□ -0.26
HDAC7-221ENST00000477203 GM2AP17900 193 aa13.44□□□□□ -0.26
HDAC7-221ENST00000477203 CSE1LP55060 971 aaKnown RBP13.44□□□□□ -0.26
HDAC7-221ENST00000477203 CDKN2DP55273 166 aa13.44□□□□□ -0.26
HDAC7-221ENST00000477203 NAB1Q13506 487 aa13.44□□□□□ -0.26
HDAC7-221ENST00000477203 SEMA3AQ14563 771 aa13.44□□□□□ -0.26
HDAC7-221ENST00000477203 PARP15Q460N3 678 aa13.44□□□□□ -0.26
HDAC7-221ENST00000477203 TMEM198Q66K66 360 aa13.44□□□□□ -0.26
HDAC7-221ENST00000477203 CNKSR3Q6P9H4 555 aa13.44□□□□□ -0.26
HDAC7-221ENST00000477203 ANKRD33Q7Z3H0 272 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms