RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 ACAP2Q15057 778 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 PARP15Q460N3 678 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 TECRLQ5HYJ1 363 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 TMEM154Q6P9G4 183 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 IZUMO2Q6UXV1 221 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 TRIM67Q6ZTA4 783 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 TFAP2DQ7Z6R9 452 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 SNX32Q86XE0 403 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 HPS6Q86YV9 775 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 KBTBD2Q8IY47 623 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 CEP70Q8NHQ1 597 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 PEX13Q92968 403 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 SPDL1Q96EA4 605 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 MFSD1Q9H3U5 465 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 POMKQ9H5K3 350 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 TLR8Q9NR97 1041 aaKnown RBP16.54■□□□□ 0.24
TMEM53-208ENST00000476724 BUD23O43709 281 aaKnown RBP16.54■□□□□ 0.24
TMEM53-208ENST00000476724 MMP2P08253 660 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 RPL17P18621 184 aaKnown RBP16.54■□□□□ 0.24
TMEM53-208ENST00000476724 RFC2P35250 354 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 CCR10P46092 362 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 PGGT1BP53609 377 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 PFKPQ01813 784 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 CSHL1Q14406 222 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 ALFQ53S48 1182 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 SLC22A9Q8IVM8 553 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 TXNDC5Q8NBS9 432 aaKnown RBP16.54■□□□□ 0.24
TMEM53-208ENST00000476724 PYDC1Q8WXC3 89 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 GATA6Q92908 595 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 ZNF689Q96CS4 500 aaPredicted RBP16.54■□□□□ 0.24
TMEM53-208ENST00000476724 PABPC5Q96DU9 382 aaKnown RBP16.54■□□□□ 0.24
TMEM53-208ENST00000476724 MOCOSQ96EN8 888 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 ZBTB26Q9HCK0 441 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.54■□□□□ 0.24
TMEM53-208ENST00000476724 ZDHHC7Q9NXF8 308 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 VWA7Q9Y334 891 aa16.54■□□□□ 0.24
TMEM53-208ENST00000476724 LOC285095A0A1B0GVY8 99 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 AIM2O14862 343 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 ZMPSTE24O75844 475 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 CNTN5O94779 1100 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 IPO13O94829 963 aaKnown RBP16.53■□□□□ 0.24
TMEM53-208ENST00000476724 PENKP01210 267 aaPredicted RBP16.53■□□□□ 0.24
TMEM53-208ENST00000476724 HAPLN1P10915 354 aaPredicted RBP16.53■□□□□ 0.24
TMEM53-208ENST00000476724 HOXB8P17481 243 aaPredicted RBP16.53■□□□□ 0.24
TMEM53-208ENST00000476724 NUDT2P50583 147 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 RING1Q06587 406 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 GPR17Q13304 367 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 PSMD5Q16401 504 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 NXNQ6DKJ4 435 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 FBXL22Q6P050 247 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 KBTBD6Q86V97 674 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 CILP2Q8IUL8 1156 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 DSELQ8IZU8 1212 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 OR13J1Q8NGT2 312 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 FBXO32Q969P5 355 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 PPP2R3CQ969Q6 453 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 PSMG2Q969U7 264 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 CCDC124Q96CT7 223 aaKnown RBP16.53■□□□□ 0.24
TMEM53-208ENST00000476724 IGSF21Q96ID5 467 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 UBXN10Q96LJ8 280 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 EFCAB1Q9HAE3 211 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 SUFUQ9UMX1 484 aa16.53■□□□□ 0.24
TMEM53-208ENST00000476724 DPPA5A6NC42 116 aa16.52■□□□□ 0.24
TMEM53-208ENST00000476724 RAMP2O60895 175 aa16.52■□□□□ 0.24
TMEM53-208ENST00000476724 RAG1P15918 1043 aa16.52■□□□□ 0.24
TMEM53-208ENST00000476724 MAPKAPK2P49137 400 aa16.52■□□□□ 0.24
TMEM53-208ENST00000476724 KPNA1P52294 538 aaPredicted RBP16.52■□□□□ 0.24
TMEM53-208ENST00000476724 MAXP61244 160 aa16.52■□□□□ 0.24
TMEM53-208ENST00000476724 DSC2Q02487 901 aa16.52■□□□□ 0.24
TMEM53-208ENST00000476724 POLD3Q15054 466 aaPredicted RBP16.52■□□□□ 0.24
TMEM53-208ENST00000476724 MGAT5BQ3V5L5 792 aa16.52■□□□□ 0.24
TMEM53-208ENST00000476724 RBM20Q5T481 1227 aaKnown RBP16.52■□□□□ 0.24
TMEM53-208ENST00000476724 HECTD2Q5U5R9 776 aa16.52■□□□□ 0.24
TMEM53-208ENST00000476724 ANKS3Q6ZW76 656 aa16.52■□□□□ 0.24
TMEM53-208ENST00000476724 NECAB2Q7Z6G3 386 aa16.52■□□□□ 0.24
TMEM53-208ENST00000476724 ZNF354CQ86Y25 554 aa16.52■□□□□ 0.24
TMEM53-208ENST00000476724 RNF168Q8IYW5 571 aaPredicted RBP16.52■□□□□ 0.24
TMEM53-208ENST00000476724 PGAM4Q8N0Y7 254 aa16.52■□□□□ 0.24
TMEM53-208ENST00000476724 SHKBP1Q8TBC3 707 aa16.52■□□□□ 0.24
TMEM53-208ENST00000476724 KLHL5Q96PQ7 755 aa16.52■□□□□ 0.24
TMEM53-208ENST00000476724 SEPT5Q99719 369 aaPredicted RBP16.52■□□□□ 0.24
TMEM53-208ENST00000476724 RC3H2Q9HBD1 1191 aaKnown RBP16.52■□□□□ 0.24
TMEM53-208ENST00000476724 MARCH2Q9P0N8 246 aa16.52■□□□□ 0.24
TMEM53-208ENST00000476724 ABHD14A-ACY1A0A1B0GW23 586 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 H7C4K7 107 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 EPOP01588 193 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 IGLV3-27P01718 113 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 ERFP50548 548 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 WDR5P61964 334 aaKnown RBP16.52■□□□□ 0.23
TMEM53-208ENST00000476724 PRAMEP78395 509 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 SMARCB1Q12824 385 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 CDC16Q13042 620 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 DUSP4Q13115 394 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 SERINC3Q13530 473 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 PEX6Q13608 980 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 RFTN1Q14699 578 aaPredicted RBP16.52■□□□□ 0.23
TMEM53-208ENST00000476724 SPOUT1Q5T280 376 aaKnown RBP16.52■□□□□ 0.23
TMEM53-208ENST00000476724 BNC2Q6ZN30 1099 aaPredicted RBP16.52■□□□□ 0.23
TMEM53-208ENST00000476724 SPATA6LQ8N4H0 392 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 FBXO22Q8NEZ5 403 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms