RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 LGMNQ99538 433 aa21.26■□□□□ 0.99
LIME1-204ENST00000476183 TCEAL2Q9H3H9 227 aaPredicted RBP21.26■□□□□ 0.99
LIME1-204ENST00000476183 RBM22Q9NW64 420 aaKnown RBP eCLIP21.26■□□□□ 0.99
LIME1-204ENST00000476183 ALG6Q9Y672 507 aa21.26■□□□□ 0.99
LIME1-204ENST00000476183 KNTC1P50748 2209 aa21.26■□□□□ 0.99
LIME1-204ENST00000476183 CACNA1BQ00975 2339 aa21.26■□□□□ 0.99
LIME1-204ENST00000476183 KMT2BQ9UMN6 2715 aaPredicted RBP21.25■□□□□ 0.99
LIME1-204ENST00000476183 RCCD1A6NED2 376 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 SPOPO43791 374 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 NEBLO76041 1014 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 RECQL5O94762 991 aaPredicted RBP21.25■□□□□ 0.99
LIME1-204ENST00000476183 PGLSO95336 258 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 CPP00450 1065 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 HLA-DQB2P05538 268 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 ELFN1P0C7U0 828 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 CCNB1P14635 433 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 JUNDP17535 347 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 THOP1P52888 689 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 HNRNPKP61978 463 aaKnown RBP eCLIP21.25■□□□□ 0.99
LIME1-204ENST00000476183 DSC2Q02487 901 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 ITKQ08881 620 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 ZNF211Q13398 564 aaPredicted RBP21.25■□□□□ 0.99
LIME1-204ENST00000476183 SPA17Q15506 151 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 FAM182AQ5T1J6 154 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 DHRS13Q6UX07 377 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 MFSD7Q6UXD7 560 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 NPNTQ6UXI9 565 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 MARCH9Q86YJ5 346 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 RBFAQ8N0V3 343 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.25■□□□□ 0.99
LIME1-204ENST00000476183 PLA2G15Q8NCC3 412 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 ZNF548Q8NEK5 533 aaPredicted RBP21.25■□□□□ 0.99
LIME1-204ENST00000476183 OR4C6Q8NH72 309 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 POLR1EQ9GZS1 481 aaKnown RBP21.25■□□□□ 0.99
LIME1-204ENST00000476183 SALL4Q9UJQ4 1053 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 PHTF1Q9UMS5 762 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 REXO2Q9Y3B8 237 aaKnown RBP21.25■□□□□ 0.99
LIME1-204ENST00000476183 PCDHGA1Q9Y5H4 931 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 HEY1Q9Y5J3 304 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 RAI2Q9Y5P3 530 aa21.25■□□□□ 0.99
LIME1-204ENST00000476183 EPN1Q9Y6I3 576 aaPredicted RBP21.25■□□□□ 0.99
LIME1-204ENST00000476183 A0A1W2PQ67 120 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 TOR1BO14657 336 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 APOL1O14791 398 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 FZD6O60353 706 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 NDUFA10O95299 355 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 PCCBP05166 539 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 PDHA1P08559 390 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 PPIDQ08752 370 aaKnown RBP21.24■□□□□ 0.99
LIME1-204ENST00000476183 NIPAL4Q0D2K0 466 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 PTK2BQ14289 1009 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 INPP5AQ14642 412 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 CNGA3Q16281 694 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 RAD9BQ6WBX8 426 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 CCNI2Q6ZMN8 369 aaPredicted RBP21.24■□□□□ 0.99
LIME1-204ENST00000476183 MACC1Q6ZN28 852 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 NYAP1Q6ZVC0 841 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 TMPRSS7Q7RTY8 843 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 TMTC1Q8IUR5 882 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 CCDC13Q8IYE1 715 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 CCNYQ8ND76 341 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 ARRDC2Q8TBH0 407 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.24■□□□□ 0.99
LIME1-204ENST00000476183 PIH1D2Q8WWB5 315 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 SMIM14Q96QK8 99 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 DDX56Q9NY93 547 aaKnown RBP21.24■□□□□ 0.99
LIME1-204ENST00000476183 OR1A2Q9Y585 309 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 FREM2Q5SZK8 3169 aa21.24■□□□□ 0.99
LIME1-204ENST00000476183 A0A0A6YYK5 440 aaPredicted RBP21.23■□□□□ 0.99
LIME1-204ENST00000476183 KCNK1O00180 336 aa21.23■□□□□ 0.99
LIME1-204ENST00000476183 SCAMP1O15126 338 aa21.23■□□□□ 0.99
LIME1-204ENST00000476183 PSTPIP1O43586 416 aa21.23■□□□□ 0.99
LIME1-204ENST00000476183 CKMT2P17540 419 aa21.23■□□□□ 0.99
LIME1-204ENST00000476183 LHCGRP22888 699 aa21.23■□□□□ 0.99
LIME1-204ENST00000476183 VIPR1P32241 457 aa21.23■□□□□ 0.99
LIME1-204ENST00000476183 TAZQ16635 292 aa21.23■□□□□ 0.99
LIME1-204ENST00000476183 ARMC12Q5T9G4 340 aa21.23■□□□□ 0.99
LIME1-204ENST00000476183 RFX6Q8HWS3 928 aa21.23■□□□□ 0.99
LIME1-204ENST00000476183 PELI3Q8N2H9 469 aa21.23■□□□□ 0.99
LIME1-204ENST00000476183 COQ10AQ96MF6 247 aa21.23■□□□□ 0.99
LIME1-204ENST00000476183 ZNF830Q96NB3 372 aaPredicted RBP21.23■□□□□ 0.99
LIME1-204ENST00000476183 OLFM3Q96PB7 478 aa21.23■□□□□ 0.99
LIME1-204ENST00000476183 APOOQ9BUR5 198 aa21.23■□□□□ 0.99
LIME1-204ENST00000476183 MAK16Q9BXY0 300 aaKnown RBP21.23■□□□□ 0.99
LIME1-204ENST00000476183 NLGN3Q9NZ94 848 aa21.23■□□□□ 0.99
LIME1-204ENST00000476183 AMACRQ9UHK6 382 aa21.23■□□□□ 0.99
LIME1-204ENST00000476183 TTLL3Q9Y4R7 772 aa21.23■□□□□ 0.99
LIME1-204ENST00000476183 A0A0U1RQS6 177 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 NPIPB15A6NHN6 443 aaPredicted RBP21.22■□□□□ 0.99
LIME1-204ENST00000476183 H3BM21 787 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 K7ESM1 405 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 RFPL3O75679 317 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 HEXIM1O94992 359 aaKnown RBP21.22■□□□□ 0.99
LIME1-204ENST00000476183 JCHAINP01591 159 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 PROS1P07225 676 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 MYF5P13349 255 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 CTPS1P17812 591 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 CDKN2BP42772 138 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 MARCKSL1P49006 195 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 PEX5P50542 639 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms