RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 TCF20Q9UGU0 1960 aaKnown RBP13.8□□□□□ -0.2
TRAF4-210ENST00000475329 TRIOBPQ9H2D6 2365 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 C2orf81A6NN90 581 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 GOLGA8TH3BQL2 631 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 GOLGA8RI6L899 631 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 TRAFD1O14545 582 aaPredicted RBP13.79□□□□□ -0.2
TRAF4-210ENST00000475329 TIMM44O43615 452 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 BNIP3LO60238 219 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 RPP40O75818 363 aaKnown RBP13.79□□□□□ -0.2
TRAF4-210ENST00000475329 POP4O95707 220 aaKnown RBP13.79□□□□□ -0.2
TRAF4-210ENST00000475329 DLDP09622 509 aaKnown RBP13.79□□□□□ -0.2
TRAF4-210ENST00000475329 CCNFP41002 786 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 SLC18A1P54219 525 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 ST8SIA6P61647 398 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 PPARDQ03181 441 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 KDSRQ06136 332 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 EIF4HQ15056 248 aaKnown RBP13.79□□□□□ -0.2
TRAF4-210ENST00000475329 TTC19Q6DKK2 380 aaPredicted RBP13.79□□□□□ -0.2
TRAF4-210ENST00000475329 ZNF470Q6ECI4 717 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 NEPROQ6NW34 567 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 PARM1Q6UWI2 310 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 Q6ZVU0 165 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 LMNTD2Q8IXW0 634 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 MICALL1Q8N3F8 863 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 OTUD6BQ8N6M0 293 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 SMRP1Q8NCR6 262 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 PTPRN2Q92932 1015 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 CENPTQ96BT3 561 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 APOPT1Q96IL0 206 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 DNAJC1Q96KC8 554 aaKnown RBP13.79□□□□□ -0.2
TRAF4-210ENST00000475329 SRPK1Q96SB4 655 aaKnown RBP13.79□□□□□ -0.2
TRAF4-210ENST00000475329 KLF6Q99612 283 aaPredicted RBP13.79□□□□□ -0.2
TRAF4-210ENST00000475329 MFSD1Q9H3U5 465 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 ZDHHC6Q9H6R6 413 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 NLE1Q9NVX2 485 aaPredicted RBP13.79□□□□□ -0.2
TRAF4-210ENST00000475329 CD207Q9UJ71 328 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 ZNF711Q9Y462 761 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 KCTD3Q9Y597 815 aa13.79□□□□□ -0.2
TRAF4-210ENST00000475329 COL4A2P08572 1712 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 RANBP2P49792 3224 aaKnown RBP13.78□□□□□ -0.2
TRAF4-210ENST00000475329 A0A1W2PQ67 120 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 HMX2A2RU54 273 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 OTOL1A6NHN0 477 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-210ENST00000475329 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-210ENST00000475329 WASH3PC4AMC7 463 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 TYROBPO43914 113 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 RFPL1O75677 317 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 ZWINTO95229 277 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 SLC4A1P02730 911 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 PYGBP11216 843 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 LPOP22079 712 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-210ENST00000475329 PSMA3P25788 255 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 GDI1P31150 447 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 GKP32189 559 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 SLC8A1P32418 973 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 HADHAP40939 763 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 ABL2P42684 1182 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 SLC1A2P43004 574 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 SLC6A11P48066 632 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 SERPINB8P50452 374 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 ARSDP51689 593 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 SLC18A2Q05940 514 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 TERF2Q15554 542 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 DPY19L3Q6ZPD9 716 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 KIAA0408Q6ZU52 694 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 TTC30BQ8N4P2 665 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 BANPQ8N9N5 519 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 C2CD4AQ8NCU7 369 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-210ENST00000475329 MDGA1Q8NFP4 955 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 OR6P1Q8NGX9 317 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 MGARPQ8TDB4 240 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 ACMSDQ8TDX5 336 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 FRS2Q8WU20 508 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 PIH1D2Q8WWB5 315 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 ATXN2LQ8WWM7 1075 aaKnown RBP13.78□□□□□ -0.2
TRAF4-210ENST00000475329 SORCS1Q8WY21 1168 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 FGF14Q92915 247 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 HDAC10Q969S8 669 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 SGSM3Q96HU1 749 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 VPS39Q96JC1 886 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 ZNF641Q96N77 438 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-210ENST00000475329 GAS2L1Q99501 681 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-210ENST00000475329 MCMBPQ9BTE3 642 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 TRMT61BQ9BVS5 477 aaKnown RBP13.78□□□□□ -0.2
TRAF4-210ENST00000475329 RHOJQ9H4E5 214 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 MAGEE1Q9HCI5 957 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 POLR3BQ9NW08 1133 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-210ENST00000475329 MKS1Q9NXB0 559 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 ELOVL2Q9NXB9 296 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 EPS15L1Q9UBC2 864 aa13.78□□□□□ -0.2
TRAF4-210ENST00000475329 USP15Q9Y4E8 981 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-210ENST00000475329 A0A0J9YYE9 177 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 TTC34A8MYJ7 566 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 CCL22O00626 93 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 COPEO14579 308 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 TPP1O14773 563 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 TM9SF1O15321 606 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 BUD23O43709 281 aaKnown RBP13.77□□□□□ -0.21
TRAF4-210ENST00000475329 TRBC1P01850 177 aa13.77□□□□□ -0.21
TRAF4-210ENST00000475329 CTPS1P17812 591 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms