RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 CAPN5O15484 640 aaPredicted RBP12.67□□□□□ -0.38
SKA3-206ENST00000475251 PLEKP08567 350 aaPredicted RBP12.67□□□□□ -0.38
SKA3-206ENST00000475251 HOXC4P09017 264 aaPredicted RBP12.67□□□□□ -0.38
SKA3-206ENST00000475251 GP1BBP13224 206 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 MMP12P39900 470 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 STAT1P42224 750 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 PTPN9P43378 593 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 POLE2P56282 527 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 KCNAB2Q13303 367 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 BIRC2Q13490 618 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 MAN2A1Q16706 1144 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 TPD52L1Q16890 204 aaPredicted RBP12.67□□□□□ -0.38
SKA3-206ENST00000475251 PARP15Q460N3 678 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 TAF3Q5VWG9 929 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 FAM114A1Q8IWE2 563 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 EMC1Q8N766 993 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 RTL3Q8N8U3 475 aaKnown RBP12.67□□□□□ -0.38
SKA3-206ENST00000475251 NTAN1Q96AB6 310 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 TUBGCP5Q96RT8 1024 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 SLC12A9Q9BXP2 914 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 CATSPERBQ9H7T0 1116 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 PCDH12Q9NPG4 1184 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 ATP8A1Q9Y2Q0 1164 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 PTPN13Q12923 2485 aa12.67□□□□□ -0.38
SKA3-206ENST00000475251 UNC13CQ8NB66 2214 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 FAM72CH0Y354 149 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 PIGNO95427 931 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 WT1P19544 449 aaPredicted RBP12.66□□□□□ -0.38
SKA3-206ENST00000475251 EPHB2P29323 1055 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 CASRP41180 1078 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 NOMO3P69849 1222 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 B4GALNT1Q00973 533 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 TRA2AQ13595 282 aaKnown RBP eCLIP12.66□□□□□ -0.38
SKA3-206ENST00000475251 C16orf72Q14CZ0 275 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 C15orf59Q2T9L4 293 aaPredicted RBP12.66□□□□□ -0.38
SKA3-206ENST00000475251 CCDC14Q49A88 953 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 C2CD6Q53TS8 623 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 EFHC2Q5JST6 749 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 FAM72AQ5TYM5 149 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 NAA35Q5VZE5 725 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 FAM72DQ6L9T8 149 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 FAM72BQ86X60 149 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 ZNF677Q86XU0 584 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 RXFP2Q8WXD0 754 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 CPA5Q8WXQ8 436 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 OR1E3Q8WZA6 343 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 NKD1Q969G9 470 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 FUBP1Q96AE4 644 aaKnown RBP12.66□□□□□ -0.38
SKA3-206ENST00000475251 DPYSL5Q9BPU6 564 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 GSDMCQ9BYG8 508 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 ASPSCR1Q9BZE9 553 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 TMEM168Q9H0V1 697 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 EPN3Q9H201 632 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 SEMA6CQ9H3T2 930 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 WDR26Q9H7D7 661 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 RDH14Q9HBH5 336 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 FGF22Q9HCT0 170 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 UBA2Q9UBT2 640 aaPredicted RBP12.66□□□□□ -0.38
SKA3-206ENST00000475251 NEU3Q9UQ49 428 aa12.66□□□□□ -0.38
SKA3-206ENST00000475251 BSNQ9UPA5 3926 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 TMEM202A6NGA9 273 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 C2CD4BA6NLJ0 364 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 ZNF891A8MT65 544 aaPredicted RBP12.65□□□□□ -0.38
SKA3-206ENST00000475251 RASA4BC9J798 803 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 RASA4O43374 803 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 ELFN1P0C7U0 828 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 SERPINA4P29622 427 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 ALDH4A1P30038 563 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 CSTF2P33240 577 aaKnown RBP eCLIP12.65□□□□□ -0.38
SKA3-206ENST00000475251 GPR3P46089 330 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 POLR2LP62875 67 aaKnown RBP12.65□□□□□ -0.38
SKA3-206ENST00000475251 FOXK1P85037 733 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 ILF3Q12906 894 aaKnown RBP eCLIP12.65□□□□□ -0.38
SKA3-206ENST00000475251 SERINC3Q13530 473 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 NR1D2Q14995 579 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 AMZ1Q400G9 498 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 TMPRSS9Q7Z410 1059 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 ZNF438Q7Z4V0 828 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 SLFN11Q7Z7L1 901 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 PTRH1Q86Y79 214 aaKnown RBP12.65□□□□□ -0.38
SKA3-206ENST00000475251 PAF1Q8N7H5 531 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 AGBL5Q8NDL9 886 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 FAM172AQ8WUF8 416 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 JPH3Q8WXH2 748 aaPredicted RBP12.65□□□□□ -0.38
SKA3-206ENST00000475251 CENPIQ92674 756 aaPredicted RBP12.65□□□□□ -0.38
SKA3-206ENST00000475251 EXOC2Q96KP1 924 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 EFHD1Q9BUP0 239 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 DDA1Q9BW61 102 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 NDST4Q9H3R1 872 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 ATP13A3Q9H7F0 1226 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 CYP4F12Q9HCS2 524 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 KCTD5Q9NXV2 234 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 LHX3Q9UBR4 397 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 MOSPD1Q9UJG1 213 aa12.65□□□□□ -0.38
SKA3-206ENST00000475251 LRRK1Q38SD2 2015 aa12.64□□□□□ -0.39
SKA3-206ENST00000475251 PRSS38A1L453 326 aa12.64□□□□□ -0.39
SKA3-206ENST00000475251 INSIG1O15503 277 aa12.64□□□□□ -0.39
SKA3-206ENST00000475251 FGF10O15520 208 aaPredicted RBP12.64□□□□□ -0.39
SKA3-206ENST00000475251 RECQL5O94762 991 aaPredicted RBP12.64□□□□□ -0.39
SKA3-206ENST00000475251 MMEP08473 750 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms