RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 CHRAC1Q9NRG0 131 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 PIH1D1Q9NWS0 290 aaKnown RBP6.66□□□□□ -1.34
ATG4A-207ENST00000474825 ELOVL2Q9NXB9 296 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 CLDND1Q9NY35 253 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 SENP1Q9P0U3 644 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 SAMD15Q9P1V8 674 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 NOVA2Q9UNW9 492 aaKnown RBP6.66□□□□□ -1.34
ATG4A-207ENST00000474825 ERVW-1Q9UQF0 538 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 STARD13Q9Y3M8 1113 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 RAI2Q9Y5P3 530 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 PRRC2BQ5JSZ5 2229 aaKnown RBP6.66□□□□□ -1.34
ATG4A-207ENST00000474825 COL6A3P12111 3177 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 DENND4AQ7Z401 1863 aa6.66□□□□□ -1.34
ATG4A-207ENST00000474825 TCF20Q9UGU0 1960 aaKnown RBP6.66□□□□□ -1.34
ATG4A-207ENST00000474825 TLDC2A0PJX2 215 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 SRRM3A6NNA2 597 aaPredicted RBP6.65□□□□□ -1.34
ATG4A-207ENST00000474825 A6NNZ2 444 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.65□□□□□ -1.34
ATG4A-207ENST00000474825 PRRT4C9JH25 899 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 POC1B-GALNT4F8VUJ3 575 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 H7C0S8 307 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 TRIM24O15164 1050 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 SLC7A4O43246 635 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 POP4O95707 220 aaKnown RBP6.65□□□□□ -1.34
ATG4A-207ENST00000474825 IGSF6O95976 241 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 PDHA1P08559 390 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 POLR2EP19388 210 aaKnown RBP6.65□□□□□ -1.34
ATG4A-207ENST00000474825 CA4P22748 312 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 GJA4P35212 333 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 GP5P40197 560 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 MAGEA12P43365 314 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 SLCO1A2P46721 670 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 GRIA4P48058 902 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 ZNF140P52738 457 aaPredicted RBP6.65□□□□□ -1.34
ATG4A-207ENST00000474825 MAGOHP61326 146 aaKnown RBP6.65□□□□□ -1.34
ATG4A-207ENST00000474825 SNRPD1P62314 119 aaKnown RBP6.65□□□□□ -1.34
ATG4A-207ENST00000474825 SLC18A2Q05940 514 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 MESP2Q0VG99 397 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 POU6F1Q14863 301 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 EFTUD2Q15029 972 aaKnown RBP eCLIP6.65□□□□□ -1.34
ATG4A-207ENST00000474825 TAF1AQ15573 450 aaPredicted RBP6.65□□□□□ -1.34
ATG4A-207ENST00000474825 DLG2Q15700 870 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 PCSK7Q16549 785 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 TUBB8Q3ZCM7 444 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 CARD16Q5EG05 197 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 GRTP1Q5TC63 336 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 ESRP1Q6NXG1 681 aaKnown RBP6.65□□□□□ -1.34
ATG4A-207ENST00000474825 CASC4Q6P4E1 433 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 KIAA0408Q6ZU52 694 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 UNC5BQ8IZJ1 945 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 TTC30BQ8N4P2 665 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 CPA6Q8N4T0 437 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 ARFGAP2Q8N6H7 521 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 OR2A12Q8NGT7 310 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 GPR150Q8NGU9 434 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 STYXQ8WUJ0 223 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 CDKL2Q92772 493 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 HLA-CQ95604 372 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 CENPTQ96BT3 561 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 IFT43Q96FT9 208 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 EXOC2Q96KP1 924 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 MCCC1Q96RQ3 725 aaPredicted RBP6.65□□□□□ -1.34
ATG4A-207ENST00000474825 CPNE1Q99829 537 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 REPIN1Q9BWE0 567 aaKnown RBP6.65□□□□□ -1.34
ATG4A-207ENST00000474825 APOL5Q9BWW9 433 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 ADGRE3Q9BY15 652 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 TMEM245Q9H330 911 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 MFSD1Q9H3U5 465 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 EBF3Q9H4W6 596 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 MAGEE1Q9HCI5 957 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 NLE1Q9NVX2 485 aaPredicted RBP6.65□□□□□ -1.34
ATG4A-207ENST00000474825 MKS1Q9NXB0 559 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 NSMCE4AQ9NXX6 385 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 PSD3Q9NYI0 1048 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 HACD3Q9P035 362 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 DEC1Q9P2X7 70 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 DKK3Q9UBP4 350 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 CTNNAL1Q9UBT7 734 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 SLCO3A1Q9UIG8 710 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 CD207Q9UJ71 328 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 SLC25A13Q9UJS0 675 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 CHKBQ9Y259 395 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 USP15Q9Y4E8 981 aaPredicted RBP6.65□□□□□ -1.34
ATG4A-207ENST00000474825 PCDHGC4Q9Y5F7 938 aa6.65□□□□□ -1.34
ATG4A-207ENST00000474825 DOCK8Q8NF50 2099 aa6.65□□□□□ -1.35
ATG4A-207ENST00000474825 SHROOM3Q8TF72 1996 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 PRUNE2Q8WUY3 3088 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 A0A0J9YYE9 177 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 IQANK1A0A1B0GTG1 560 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 NPC1O15118 1278 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 PRPF4O43172 522 aaKnown RBP eCLIP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 RRP9O43818 475 aaKnown RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 TYROBPO43914 113 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 UGT1A9O60656 530 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 SHOX2O60902 331 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 RFPL1O75677 317 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 KRT37O76014 449 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 KRT38O76015 456 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 CRTAMO95727 393 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 TRBC1P01850 177 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms