RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 FPGTO14772 594 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 PPP1R12AO14974 1030 aaPredicted RBP19.03■□□□□ 0.64
PTCD3-210ENST00000473829 FLRT2O43155 660 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 FZD6O60353 706 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 DFNA5O60443 496 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 MAGEC1O60732 1142 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 MMP2P08253 660 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 TGM2P21980 687 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 EPHA8P29322 1005 aaPredicted RBP19.03■□□□□ 0.64
PTCD3-210ENST00000473829 PFN3P60673 137 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 BNIP3Q12983 259 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 PRKD1Q15139 912 aaPredicted RBP19.03■□□□□ 0.64
PTCD3-210ENST00000473829 PPP2R5EQ16537 467 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 WSCD2Q2TBF2 565 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 AADACL2Q6P093 401 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 LIPIQ6XZB0 460 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 KANSL1Q7Z3B3 1105 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 BAHD1Q8TBE0 780 aaPredicted RBP19.03■□□□□ 0.64
PTCD3-210ENST00000473829 SAP25Q8TEE9 199 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 SETD7Q8WTS6 366 aaKnown RBP19.03■□□□□ 0.64
PTCD3-210ENST00000473829 PIH1D2Q8WWB5 315 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 SLC32A1Q9H598 525 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 GRPEL1Q9HAV7 217 aa19.03■□□□□ 0.64
PTCD3-210ENST00000473829 PACSIN2Q9UNF0 486 aaPredicted RBP19.03■□□□□ 0.64
PTCD3-210ENST00000473829 CCDC66A2RUB6 948 aa19.02■□□□□ 0.64
PTCD3-210ENST00000473829 ARHGAP6O43182 974 aa19.02■□□□□ 0.64
PTCD3-210ENST00000473829 NEBLO76041 1014 aa19.02■□□□□ 0.64
PTCD3-210ENST00000473829 FTCDO95954 541 aa19.02■□□□□ 0.64
PTCD3-210ENST00000473829 ADRB1P08588 477 aa19.02■□□□□ 0.64
PTCD3-210ENST00000473829 LHCGRP22888 699 aa19.02■□□□□ 0.64
PTCD3-210ENST00000473829 RXRGP48443 463 aa19.02■□□□□ 0.64
PTCD3-210ENST00000473829 POLR2LP62875 67 aaKnown RBP19.02■□□□□ 0.64
PTCD3-210ENST00000473829 CCZ1BP86790 482 aa19.02■□□□□ 0.64
PTCD3-210ENST00000473829 CCZ1P86791 482 aaPredicted RBP19.02■□□□□ 0.64
PTCD3-210ENST00000473829 ARMC12Q5T9G4 340 aa19.02■□□□□ 0.64
PTCD3-210ENST00000473829 BBS12Q6ZW61 710 aa19.02■□□□□ 0.64
PTCD3-210ENST00000473829 LRRC8AQ8IWT6 810 aa19.02■□□□□ 0.64
PTCD3-210ENST00000473829 TDRD1Q9BXT4 1180 aaKnown RBP19.02■□□□□ 0.64
PTCD3-210ENST00000473829 SEPT10Q9P0V9 454 aa19.02■□□□□ 0.64
PTCD3-210ENST00000473829 TDRD6O60522 2096 aaKnown RBP19.02■□□□□ 0.63
PTCD3-210ENST00000473829 A0A0U1RQS6 177 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 A0A1W2PQ67 120 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 NPIPB15A6NHN6 443 aaPredicted RBP19.01■□□□□ 0.63
PTCD3-210ENST00000473829 SDC3O75056 442 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 ALPIP09923 528 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 ELFN1P0C7U0 828 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 CTPS1P17812 591 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 RABIFP47224 123 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 NR2C2P49116 596 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 ARRB1P49407 418 aaPredicted RBP19.01■□□□□ 0.63
PTCD3-210ENST00000473829 FZD2Q14332 565 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 AGERQ15109 404 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 CNGA3Q16281 694 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 TSPAN33Q86UF1 283 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 TXLNBQ8N3L3 684 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 OXR1Q8N573 874 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 FAM174AQ8TBP5 190 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 P3H4Q92791 437 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 AGAP3Q96P47 875 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 MCCC1Q96RQ3 725 aaPredicted RBP19.01■□□□□ 0.63
PTCD3-210ENST00000473829 C1QTNF7Q9BXJ2 289 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 PHTF1Q9UMS5 762 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 CHKBQ9Y259 395 aa19.01■□□□□ 0.63
PTCD3-210ENST00000473829 COL5A1P20908 1838 aaPredicted RBP19.01■□□□□ 0.63
PTCD3-210ENST00000473829 LRP4O75096 1905 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 SPTY2D1-AS1A0A0U1RR47 76 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 CFAP69A5D8W1 941 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 GOLGA8CPA6NN73 597 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 YKT6O15498 198 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 DDX3YO15523 660 aaKnown RBP19■□□□□ 0.63
PTCD3-210ENST00000473829 LZTS3O60299 673 aaPredicted RBP19■□□□□ 0.63
PTCD3-210ENST00000473829 RECQL5O94762 991 aaPredicted RBP19■□□□□ 0.63
PTCD3-210ENST00000473829 PRLP01236 227 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 PYGMP11217 842 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 VIPR1P32241 457 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 PTPN7P35236 360 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 CD86P42081 329 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 RWDD2BP57060 319 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 COPS2P61201 443 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 SIM1P81133 766 aaPredicted RBP19■□□□□ 0.63
PTCD3-210ENST00000473829 SKOR1P84550 965 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 PDE1CQ14123 709 aaPredicted RBP19■□□□□ 0.63
PTCD3-210ENST00000473829 LRRC14Q15048 493 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 ZNF542PQ5EBM4 170 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 PEX26Q7Z412 305 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 ZC3H18Q86VM9 953 aaKnown RBP19■□□□□ 0.63
PTCD3-210ENST00000473829 PLA2G15Q8NCC3 412 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 CCDC112Q8NEF3 446 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 RHBDD1Q8TEB9 315 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 TFB1MQ8WVM0 346 aaKnown RBP19■□□□□ 0.63
PTCD3-210ENST00000473829 OSBPL8Q9BZF1 889 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 BRD8Q9H0E9 1235 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 AMFRQ9UKV5 643 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 PNMA8BQ9ULN7 279 aaPredicted RBP19■□□□□ 0.63
PTCD3-210ENST00000473829 PPIL1Q9Y3C6 166 aa19■□□□□ 0.63
PTCD3-210ENST00000473829 HEXIM1O94992 359 aaKnown RBP18.99■□□□□ 0.63
PTCD3-210ENST00000473829 PCCBP05166 539 aa18.99■□□□□ 0.63
PTCD3-210ENST00000473829 ITGAVP06756 1048 aa18.99■□□□□ 0.63
PTCD3-210ENST00000473829 CES1P23141 567 aa18.99■□□□□ 0.63
PTCD3-210ENST00000473829 PTPN3P26045 913 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms