RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 LRIT1Q9P2V4 623 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 KLQ9UEF7 1012 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 RWDD2AQ9UIY3 292 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 PLEKHM1Q9Y4G2 1056 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 DGKBQ9Y6T7 804 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 DOPEY2Q9Y3R5 2298 aa9.68□□□□□ -0.86
MCF2L-223ENST00000473345 NBPF19A0A087WUL8 3843 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 IGHV5-10-1A0A0J9YXX1 117 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 CXorf51AA0A1B0GTR3 108 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 TCRBV5S1A1TA0A578 114 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 TTC24A2A3L6 582 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-223ENST00000473345 A8MX80 341 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-223ENST00000473345 RASA4BC9J798 803 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 RASA4O43374 803 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 RECQL5O94762 991 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-223ENST00000473345 CYP1A1P04798 512 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-223ENST00000473345 FGF1P05230 155 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 ALPIP09923 528 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 GLB1P16278 677 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 CR2P20023 1033 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 MPSTP25325 297 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 AK4P27144 223 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-223ENST00000473345 CD1CP29017 333 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 PPP1R2P41236 205 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 RHOAP61586 193 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 FOXK1P85037 733 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 FMO1Q01740 532 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 RAPGEF1Q13905 1077 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 C14orf28Q4W4Y0 310 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 PHF19Q5T6S3 580 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 SMYD5Q6GMV2 418 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 LIPIQ6XZB0 460 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 ARHGAP36Q6ZRI8 547 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 ARCQ7LC44 396 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 TAF8Q7Z7C8 310 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 GKN2Q86XP6 184 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 RTL3Q8N8U3 475 aaKnown RBP9.67□□□□□ -0.86
MCF2L-223ENST00000473345 FAM46DQ8NEK8 389 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 TBC1D31Q96DN5 1066 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 RNF31Q96EP0 1072 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 C11orf70Q9BRQ4 267 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 ARHGAP9Q9BRR9 750 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 SPRY4Q9C004 299 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 STRADBQ9C0K7 418 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 SUV39H2Q9H5I1 410 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 DOLKQ9UPQ8 538 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 PCYT1BQ9Y5K3 369 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-223ENST00000473345 B3GALT1Q9Y5Z6 326 aa9.67□□□□□ -0.86
MCF2L-223ENST00000473345 FLNCQ14315 2725 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 A0A1W2PQC6 194 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 F8VZ95 297 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 PPM1DO15297 605 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 TNFAIP3P21580 790 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 MMP8P22894 467 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 RFC1P35251 1148 aaPredicted RBP9.66□□□□□ -0.86
MCF2L-223ENST00000473345 TRIM23P36406 574 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 POLE2P56282 527 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 KIAA1024LP59773 190 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 OGDHQ02218 1023 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 MTM1Q13496 603 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 SERINC3Q13530 473 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 UBAP2LQ14157 1087 aaKnown RBP9.66□□□□□ -0.86
MCF2L-223ENST00000473345 NR1D2Q14995 579 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 CAMK4Q16566 473 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 AMZ1Q400G9 498 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 ATP1A1-AS1Q5TC04 95 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 RFLNAQ6ZTI6 216 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 TIPARPQ7Z3E1 657 aaKnown RBP9.66□□□□□ -0.86
MCF2L-223ENST00000473345 ZNF438Q7Z4V0 828 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 TSEN2Q8NCE0 465 aaKnown RBP9.66□□□□□ -0.86
MCF2L-223ENST00000473345 OR56A4Q8NGH8 313 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 ZNF564Q8TBZ8 553 aaPredicted RBP9.66□□□□□ -0.86
MCF2L-223ENST00000473345 FAM172AQ8WUF8 416 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 ARHGEF26Q96DR7 871 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 CELF6Q96J87 481 aaKnown RBP9.66□□□□□ -0.86
MCF2L-223ENST00000473345 CCDC74BQ96LY2 380 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 PSMG3-AS1Q96PY0 264 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 SMIM14Q96QK8 99 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 GANQ9H2C0 597 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 NDST4Q9H3R1 872 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 LRRC19Q9H756 370 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 SUDS3Q9H7L9 328 aaPredicted RBP9.66□□□□□ -0.86
MCF2L-223ENST00000473345 CYP4F12Q9HCS2 524 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 GPATCH2LQ9NWQ4 482 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 OCIAD1Q9NX40 245 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 PLAAQ9Y263 795 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 MAN2B2Q9Y2E5 1009 aa9.66□□□□□ -0.86
MCF2L-223ENST00000473345 GOLGA6L4A6NEF3 574 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 TRAFD1O14545 582 aaPredicted RBP9.65□□□□□ -0.86
MCF2L-223ENST00000473345 TOR1BO14657 336 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 NKX2-8O15522 239 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 CCP110O43303 1012 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 PPFIA2O75334 1257 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 EML2O95834 649 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 IGSF6O95976 241 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 TNFP01375 233 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 RNF224P0DH78 156 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 UCHL3P15374 230 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 PNLIPP16233 465 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms