RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 PPARGC1AQ9UBK2 798 aaKnown RBP7□□□□□ -1.29
CKS1B-205ENST00000473344 PISDQ9UG56 409 aa7□□□□□ -1.29
CKS1B-205ENST00000473344 DNAI1Q9UI46 699 aa7□□□□□ -1.29
CKS1B-205ENST00000473344 GGT7Q9UJ14 662 aa7□□□□□ -1.29
CKS1B-205ENST00000473344 DNAJC12Q9UKB3 198 aa7□□□□□ -1.29
CKS1B-205ENST00000473344 PYCARDQ9ULZ3 195 aa7□□□□□ -1.29
CKS1B-205ENST00000473344 RRP15Q9Y3B9 282 aaKnown RBP7□□□□□ -1.29
CKS1B-205ENST00000473344 ACTL7AQ9Y615 435 aa7□□□□□ -1.29
CKS1B-205ENST00000473344 KNL1Q8NG31 2342 aa7□□□□□ -1.29
CKS1B-205ENST00000473344 ASXL3Q9C0F0 2248 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 FAM170AA1A519 330 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 GTPBP10A4D1E9 387 aaKnown RBP6.99□□□□□ -1.29
CKS1B-205ENST00000473344 TMEM110-MUSTN1A8MSY1 372 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 EFCAB8A8MWE9 144 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 D6RAR5 112 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 GOLGA8SH3BPF8 625 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 AGRPO00253 132 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 FOXN3O00409 490 aaPredicted RBP6.99□□□□□ -1.29
CKS1B-205ENST00000473344 NTN3O00634 580 aaPredicted RBP6.99□□□□□ -1.29
CKS1B-205ENST00000473344 CASC3O15234 703 aaKnown RBP6.99□□□□□ -1.29
CKS1B-205ENST00000473344 NVLO15381 856 aaKnown RBP6.99□□□□□ -1.29
CKS1B-205ENST00000473344 EFSO43281 561 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 RAMP2O60895 175 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 RASGRP1O95267 797 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 IGSF6O95976 241 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 GSRP00390 522 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 CPP00450 1065 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 FAM87AP0C7U9 286 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 PNMA6AP0CW24 399 aaPredicted RBP6.99□□□□□ -1.29
CKS1B-205ENST00000473344 HGFP14210 728 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 PON1P27169 355 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 FLT3P36888 993 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 ACVRL1P37023 503 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 SCNN1AP37088 669 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 MTIF2P46199 727 aaKnown RBP6.99□□□□□ -1.29
CKS1B-205ENST00000473344 MAPKAPK2P49137 400 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 PEX5P50542 639 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 ZNF75DP51815 510 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 PDX1P52945 283 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 CCL7P80098 99 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 ATP11AP98196 1134 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 RAPGEF1Q13905 1077 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 LRRC14Q15048 493 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 TGIF1Q15583 401 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 CDO1Q16878 200 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 MYLK3Q32MK0 819 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 LRRC73Q5JTD7 316 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 TMEM164Q5U3C3 297 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 B3GNT8Q7Z7M8 397 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 XYLT1Q86Y38 959 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 EXD3Q8N9H8 876 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 ZNF511Q8NB15 262 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 KYQ8NBH2 561 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 ARHGEF2Q92974 986 aaKnown RBP6.99□□□□□ -1.29
CKS1B-205ENST00000473344 TSACCQ96A04 125 aaPredicted RBP6.99□□□□□ -1.29
CKS1B-205ENST00000473344 TMEM159Q96B96 161 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 GDAP1L1Q96MZ0 367 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 CMKLR1Q99788 373 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 FUCA2Q9BTY2 467 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 CLPBQ9H078 707 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 MAGEH1Q9H213 219 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 KCNF1Q9H3M0 494 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 RETREG1Q9H6L5 497 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 L2HGDHQ9H9P8 463 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 ARFGAP3Q9NP61 516 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 MBNL1Q9NR56 388 aaKnown RBP6.99□□□□□ -1.29
CKS1B-205ENST00000473344 AKAP7Q9P0M2 348 aaPredicted RBP6.99□□□□□ -1.29
CKS1B-205ENST00000473344 OR12D3Q9UGF7 316 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 SEPT3Q9UH03 358 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 GPR34Q9UPC5 381 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 LOXL2Q9Y4K0 774 aa6.99□□□□□ -1.29
CKS1B-205ENST00000473344 PTPRQQ9UMZ3 2332 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 A0A087WUV0 522 aaPredicted RBP6.98□□□□□ -1.29
CKS1B-205ENST00000473344 ZSCAN5CA6NGD5 496 aaPredicted RBP6.98□□□□□ -1.29
CKS1B-205ENST00000473344 CYSRT1A8MQ03 144 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 PES1O00541 588 aaKnown RBP6.98□□□□□ -1.29
CKS1B-205ENST00000473344 AREL1O15033 823 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 BUB1O43683 1085 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 NOBOXO60393 691 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 PPFIA2O75334 1257 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 LSM8O95777 96 aaKnown RBP6.98□□□□□ -1.29
CKS1B-205ENST00000473344 CD160O95971 181 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 TNFP01375 233 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 CELA2BP08218 269 aaPredicted RBP6.98□□□□□ -1.29
CKS1B-205ENST00000473344 CYP11B1P15538 503 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 GLB1P16278 677 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 RHOQP17081 205 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 ITIH1P19827 911 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 SDC4P31431 198 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 CCKBRP32239 447 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 GABRB2P47870 512 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 SUOXP51687 545 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 MAPK10P53779 464 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 SRP54P61011 504 aaKnown RBP6.98□□□□□ -1.29
CKS1B-205ENST00000473344 RHOAP61586 193 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 NFKB2Q00653 900 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 ELP6Q0PNE2 266 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 ARHGEF7Q14155 803 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 INPP5AQ14642 412 aa6.98□□□□□ -1.29
CKS1B-205ENST00000473344 NFATC4Q14934 902 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms