RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 PEX13Q92968 403 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 INTS4Q96HW7 963 aaKnown RBP6.08□□□□□ -1.44
RTF1-203ENST00000473214 MED15Q96RN5 788 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 SEMA3CQ99985 751 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 TPPP3Q9BW30 176 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 CDADC1Q9BWV3 514 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 SLC12A9Q9BXP2 914 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 TINAGL1Q9GZM7 467 aaPredicted RBP6.08□□□□□ -1.44
RTF1-203ENST00000473214 ASCC2Q9H1I8 757 aaPredicted RBP6.08□□□□□ -1.44
RTF1-203ENST00000473214 KCNH6Q9H252 994 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 EPB41L1Q9H4G0 881 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 SYNDIG1Q9H7V2 258 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 UNKLQ9H9P5 680 aaKnown RBP6.08□□□□□ -1.44
RTF1-203ENST00000473214 ALKBH4Q9NXW9 302 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 KLHL14Q9P2G3 628 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 GULP1Q9UBP9 304 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 DNAJB11Q9UBS4 358 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 SUFUQ9UMX1 484 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 C15orf41Q9Y2V0 281 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 GMEB1Q9Y692 573 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 TEX264Q9Y6I9 313 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 COMMD3-BMI1R4GMX3 469 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 MAP3K5Q99683 1374 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 KIF7Q2M1P5 1343 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 PNMA6EA0A0J9YXQ4 647 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 EIF3CLB5ME19 914 aaKnown RBP6.07□□□□□ -1.44
RTF1-203ENST00000473214 KIF28PB7ZC32 967 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 F2RL2O00254 374 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 CIB2O75838 187 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 IPO13O94829 963 aaKnown RBP6.07□□□□□ -1.44
RTF1-203ENST00000473214 LRIG2O94898 1065 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 LY86O95711 162 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 VIPP01282 170 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 C4BPAP04003 597 aaKnown RBP6.07□□□□□ -1.44
RTF1-203ENST00000473214 CYP21A2P08686 494 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 HSPA8P11142 646 aaKnown RBP6.07□□□□□ -1.44
RTF1-203ENST00000473214 RALAP11233 206 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 GABRB1P18505 474 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 HNRNPA2B1P22626 353 aaKnown RBP6.07□□□□□ -1.44
RTF1-203ENST00000473214 PRKACBP22694 351 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 TCEA1P23193 301 aaKnown RBP6.07□□□□□ -1.44
RTF1-203ENST00000473214 SFNP31947 248 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 GJA4P35212 333 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 SOAT1P35610 550 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 GDNFP39905 211 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 SLC6A9P48067 706 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 PIK3CGP48736 1102 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 CLCNKAP51800 687 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 WNT3P56703 355 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 SLC8A3P57103 927 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 EIF3EP60228 445 aaKnown RBP6.07□□□□□ -1.44
RTF1-203ENST00000473214 UFM1P61960 85 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 ZNF273Q14593 569 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 LRRC24Q50LG9 513 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 ZNF766Q5HY98 468 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 SH2D4BQ5SQS7 431 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 SFRP5Q5T4F7 317 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 PDPK2PQ6A1A2 396 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 PLAG1Q6DJT9 500 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 CDC73Q6P1J9 531 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 MOXD1Q6UVY6 613 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 COMTD1Q86VU5 262 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 SLC22A9Q8IVM8 553 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 MINDY1Q8N5J2 469 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 EIF1ADQ8N9N8 165 aaKnown RBP6.07□□□□□ -1.44
RTF1-203ENST00000473214 GPR156Q8NFN8 814 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 TRIM58Q8NG06 486 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 HDAC7Q8WUI4 952 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 ASB15Q8WXK1 588 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 INPP5DQ92835 1189 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 SLAMF9Q96A28 289 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 FOXRED1Q96CU9 486 aaPredicted RBP6.07□□□□□ -1.44
RTF1-203ENST00000473214 HDAC11Q96DB2 347 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 LRRC39Q96DD0 335 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 TSPAN17Q96FV3 270 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 FBXL20Q96IG2 436 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 MAP6Q96JE9 813 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 PAFAH2Q99487 392 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 EIF3CQ99613 913 aaKnown RBP6.07□□□□□ -1.44
RTF1-203ENST00000473214 PKP2Q99959 881 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 CARS2Q9HA77 564 aaKnown RBP6.07□□□□□ -1.44
RTF1-203ENST00000473214 TMEM184CQ9NVA4 438 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 FBXW2Q9UKT8 454 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 CCPG1Q9ULG6 757 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 ADAM18Q9Y3Q7 739 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 PCDHB6Q9Y5E3 794 aa6.07□□□□□ -1.44
RTF1-203ENST00000473214 ADCY9O60503 1353 aa6.06□□□□□ -1.44
RTF1-203ENST00000473214 TCRBV21S2A2A0A5A6 115 aa6.06□□□□□ -1.44
RTF1-203ENST00000473214 SH3D21A4FU49 640 aa6.06□□□□□ -1.44
RTF1-203ENST00000473214 HTR3EA5X5Y0 456 aa6.06□□□□□ -1.44
RTF1-203ENST00000473214 GAGE10A6NGK3 116 aa6.06□□□□□ -1.44
RTF1-203ENST00000473214 SH2D7A6NKC9 451 aaPredicted RBP6.06□□□□□ -1.44
RTF1-203ENST00000473214 A6NL46 340 aa6.06□□□□□ -1.44
RTF1-203ENST00000473214 FAM90A27PA6NNH2 459 aa6.06□□□□□ -1.44
RTF1-203ENST00000473214 A8MZ25 164 aa6.06□□□□□ -1.44
RTF1-203ENST00000473214 MYO1CO00159 1063 aa6.06□□□□□ -1.44
RTF1-203ENST00000473214 RPP40O75818 363 aaKnown RBP6.06□□□□□ -1.44
RTF1-203ENST00000473214 AKAP3O75969 853 aa6.06□□□□□ -1.44
RTF1-203ENST00000473214 SIX3O95343 332 aaPredicted RBP6.06□□□□□ -1.44
RTF1-203ENST00000473214 PRLP01236 227 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms