RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 NYNRINQ9P2P1 1898 aaKnown RBP17.61■□□□□ 0.41
HSPG2-208ENST00000471322 MRPS17Q9Y2R5 130 aaKnown RBP17.61■□□□□ 0.41
HSPG2-208ENST00000471322 ANTXRLA6NF34 631 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 CBX4O00257 560 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 EBAG9O00559 213 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 TRIM24O15164 1050 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 RFPL1O75677 317 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 PAPSS2O95340 614 aaPredicted RBP17.6■□□□□ 0.41
HSPG2-208ENST00000471322 NMBRP28336 390 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 HADHAP40939 763 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 CCNFP41002 786 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 CCT5P48643 541 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 CSE1LP55060 971 aaKnown RBP17.6■□□□□ 0.41
HSPG2-208ENST00000471322 CDK18Q07002 472 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 FZD5Q13467 585 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 CDH18Q13634 790 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 INO80DQ53TQ3 878 aaPredicted RBP17.6■□□□□ 0.41
HSPG2-208ENST00000471322 GKAP1Q5VSY0 366 aaPredicted RBP17.6■□□□□ 0.41
HSPG2-208ENST00000471322 RGS9BPQ6ZS82 235 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 ZNF687Q8N1G0 1237 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 TCP10LQ8TDR4 215 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 OTUB2Q96DC9 234 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 P2RY13Q9BPV8 354 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 FEM1AQ9BSK4 669 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 BBS2Q9BXC9 721 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 FAM107BQ9H098 131 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 RABEP2Q9H5N1 569 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 LMAN1LQ9HAT1 526 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 MLXIPLQ9NP71 852 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 GGA2Q9UJY4 613 aa17.6■□□□□ 0.41
HSPG2-208ENST00000471322 ARIH1Q9Y4X5 557 aaPredicted RBP17.6■□□□□ 0.41
HSPG2-208ENST00000471322 ATG2BQ96BY7 2078 aa17.59■□□□□ 0.41
HSPG2-208ENST00000471322 GOLGA8RI6L899 631 aa17.59■□□□□ 0.41
HSPG2-208ENST00000471322 CYBBP04839 570 aa17.59■□□□□ 0.41
HSPG2-208ENST00000471322 FGF1P05230 155 aa17.59■□□□□ 0.41
HSPG2-208ENST00000471322 OPRD1P41143 372 aa17.59■□□□□ 0.41
HSPG2-208ENST00000471322 NEK3P51956 506 aa17.59■□□□□ 0.41
HSPG2-208ENST00000471322 PDE1BQ01064 536 aa17.59■□□□□ 0.41
HSPG2-208ENST00000471322 KDSRQ06136 332 aa17.59■□□□□ 0.41
HSPG2-208ENST00000471322 UGP2Q16851 508 aa17.59■□□□□ 0.41
HSPG2-208ENST00000471322 HSP90AA5PQ58FG0 334 aa17.59■□□□□ 0.41
HSPG2-208ENST00000471322 Q6ZS52 159 aa17.59■□□□□ 0.41
HSPG2-208ENST00000471322 SLC25A41Q8N5S1 370 aa17.59■□□□□ 0.41
HSPG2-208ENST00000471322 DDI1Q8WTU0 396 aa17.59■□□□□ 0.41
HSPG2-208ENST00000471322 KLF6Q99612 283 aaPredicted RBP17.59■□□□□ 0.41
HSPG2-208ENST00000471322 VPS11Q9H270 941 aa17.59■□□□□ 0.41
HSPG2-208ENST00000471322 MUC6Q6W4X9 2439 aa17.59■□□□□ 0.41
HSPG2-208ENST00000471322 HMX2A2RU54 273 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 TCP11X1B4DZS4 312 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 INSIG1O15503 277 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 TIMM44O43615 452 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 EGFP01133 1207 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 ITGA2BP08514 1039 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 TYRP14679 529 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 NSUN2Q08J23 767 aaKnown RBP eCLIP17.58■□□□□ 0.41
HSPG2-208ENST00000471322 BMPR2Q13873 1038 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 PDK4Q16654 411 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 RALGPS1Q5JS13 557 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 KIAA0930Q6ICG6 404 aaPredicted RBP17.58■□□□□ 0.41
HSPG2-208ENST00000471322 FSTL4Q6MZW2 842 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 LVRNQ6Q4G3 990 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 MICALCLQ6ZW33 695 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 KDELC2Q7Z4H8 507 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 STRA8Q7Z7C7 330 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 LRRC34Q8IZ02 419 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 KIAA1958Q8N8K9 716 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 PEX13Q92968 403 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 DLGAP2Q9P1A6 1054 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 VPS28Q9UK41 221 aa17.58■□□□□ 0.41
HSPG2-208ENST00000471322 CXorf51AA0A1B0GTR3 108 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 MUSKO15146 869 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 CHRNB1P11230 501 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 CRHR1P34998 444 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 CHRNA4P43681 627 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 GRSF1Q12849 480 aaKnown RBP eCLIP17.58■□□□□ 0.4
HSPG2-208ENST00000471322 CYTH1Q15438 398 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 TMEM196Q5HYL7 178 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 SIRPB2Q5JXA9 342 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 FYB2Q5VWT5 728 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 RETSATQ6NUM9 610 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 METTL3Q86U44 580 aaKnown RBP17.58■□□□□ 0.4
HSPG2-208ENST00000471322 MFN1Q8IWA4 741 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 CNTN4Q8IWV2 1026 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 DCAF4L2Q8NA75 395 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 MSANTD3Q96H12 275 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 NUDCD1Q96RS6 583 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 NELL2Q99435 816 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 RBBP8Q99708 897 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 C2orf49Q9BVC5 232 aaPredicted RBP17.58■□□□□ 0.4
HSPG2-208ENST00000471322 SCUBE2Q9NQ36 999 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 IARS2Q9NSE4 1012 aaKnown RBP17.58■□□□□ 0.4
HSPG2-208ENST00000471322 TREX1Q9NSU2 369 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 KIAA1522Q9P206 1035 aaPredicted RBP17.58■□□□□ 0.4
HSPG2-208ENST00000471322 OR51B4Q9Y5P0 310 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 PSAT1Q9Y617 370 aa17.58■□□□□ 0.4
HSPG2-208ENST00000471322 SIN3BO75182 1162 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 ZMPSTE24O75844 475 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 NDST3O95803 873 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 ATXN1LP0C7T5 689 aaKnown RBP17.57■□□□□ 0.4
HSPG2-208ENST00000471322 CR2P20023 1033 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms