RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 SP110Q9HB58 689 aa12.59□□□□□ -0.39
CCNL1-213ENST00000471044 UCKL1Q9NWZ5 548 aa12.59□□□□□ -0.39
CCNL1-213ENST00000471044 IP6K2Q9UHH9 426 aa12.59□□□□□ -0.39
CCNL1-213ENST00000471044 ANAPC7Q9UJX3 599 aa12.59□□□□□ -0.39
CCNL1-213ENST00000471044 NENFQ9UMX5 172 aa12.59□□□□□ -0.39
CCNL1-213ENST00000471044 TRIM38O00635 465 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 TOR1BO14657 336 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 SIGLEC6O43699 453 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 BUB1BO60566 1050 aaPredicted RBP12.58□□□□□ -0.4
CCNL1-213ENST00000471044 CSF2P04141 144 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 RARAP10276 462 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 XPAP23025 273 aaPredicted RBP12.58□□□□□ -0.4
CCNL1-213ENST00000471044 AMPD1P23109 780 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 IGFALSP35858 605 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 RGRP47804 291 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 HNRNPKP61978 463 aaKnown RBP eCLIP12.58□□□□□ -0.4
CCNL1-213ENST00000471044 YPEL5P62699 121 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 SLC25A11Q02978 314 aaKnown RBP12.58□□□□□ -0.4
CCNL1-213ENST00000471044 NSUN2Q08J23 767 aaKnown RBP eCLIP12.58□□□□□ -0.4
CCNL1-213ENST00000471044 ZNF211Q13398 564 aaPredicted RBP12.58□□□□□ -0.4
CCNL1-213ENST00000471044 UGP2Q16851 508 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 SMTNL2Q2TAL5 461 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 HS1BP3Q53T59 392 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 TXNRD3NBQ6F5E7 133 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 BRAT1Q6PJG6 821 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 ARHGAP36Q6ZRI8 547 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 PARGQ86W56 976 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 TP53INP2Q8IXH6 220 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 TP53I13Q8NBR0 393 aaPredicted RBP12.58□□□□□ -0.4
CCNL1-213ENST00000471044 HSPH1Q92598 858 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 BTBD6Q96KE9 485 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 ZNF599Q96NL3 588 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 CINPQ9BW66 212 aaPredicted RBP12.58□□□□□ -0.4
CCNL1-213ENST00000471044 CCDC86Q9H6F5 360 aaKnown RBP12.58□□□□□ -0.4
CCNL1-213ENST00000471044 DNAJC28Q9NX36 388 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 NLGN3Q9NZ94 848 aa12.58□□□□□ -0.4
CCNL1-213ENST00000471044 IPO11Q9UI26 975 aaKnown RBP12.58□□□□□ -0.4
CCNL1-213ENST00000471044 URB1O60287 2271 aaKnown RBP12.58□□□□□ -0.4
CCNL1-213ENST00000471044 KALRNO60229 2985 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 NEMP2A6NFY4 417 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 MYO1FO00160 1098 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 SCAMP1O15126 338 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 CBFA2T2O43439 604 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 ALPPL2P10696 532 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 NME1P15531 152 aaKnown RBP12.57□□□□□ -0.4
CCNL1-213ENST00000471044 RENBPP51606 427 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 EIF2B5Q13144 721 aaKnown RBP12.57□□□□□ -0.4
CCNL1-213ENST00000471044 PDE1CQ14123 709 aaPredicted RBP12.57□□□□□ -0.4
CCNL1-213ENST00000471044 TRIM14Q14142 442 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 PTK2BQ14289 1009 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 COL28A1Q2UY09 1125 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 TPRG1LQ5T0D9 272 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 TMCO3Q6UWJ1 677 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 ZSWIM9Q86XI8 627 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 CAMK1DQ8IU85 385 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 CACTIN-AS1Q8N1I8 211 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 FAM71BQ8TC56 605 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 ECHDC3Q96DC8 303 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 CSPG4P5Q96PW8 444 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 PSKH2Q96QS6 385 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 WRAP53Q9BUR4 548 aaKnown RBP12.57□□□□□ -0.4
CCNL1-213ENST00000471044 C1QTNF7Q9BXJ2 289 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 ATP13A3Q9H7F0 1226 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 CAAP1Q9H8G2 361 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 PCDH18Q9HCL0 1135 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 MBNL1Q9NR56 388 aaKnown RBP12.57□□□□□ -0.4
CCNL1-213ENST00000471044 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCNL1-213ENST00000471044 ETNK2Q9NVF9 386 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 PGPEP1Q9NXJ5 209 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 DKK4Q9UBT3 224 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 CSNK1G3Q9Y6M4 447 aa12.57□□□□□ -0.4
CCNL1-213ENST00000471044 COL27A1Q8IZC6 1860 aaPredicted RBP12.57□□□□□ -0.4
CCNL1-213ENST00000471044 CFAP69A5D8W1 941 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 FAM149AA5PLN7 773 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 TRABD2BA6NFA1 517 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 MUSKO15146 869 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 FFAR2O15552 330 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 SERPINA4P29622 427 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 SERPINB6P35237 376 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 HNF1BP35680 557 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 EIF4A3P38919 411 aaKnown RBP12.56□□□□□ -0.4
CCNL1-213ENST00000471044 AP1S1P61966 158 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 DAB2P98082 770 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 BCL2L1Q07817 233 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 SLC10A7Q0GE19 358 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 LBRQ14739 615 aaKnown RBP12.56□□□□□ -0.4
CCNL1-213ENST00000471044 HADHQ16836 314 aaKnown RBP12.56□□□□□ -0.4
CCNL1-213ENST00000471044 ZNF542PQ5EBM4 170 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 CFAP58Q5T655 872 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 TMCO4Q5TGY1 634 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 ERAP2Q6P179 960 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 KDM7AQ6ZMT4 941 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 MARCH9Q86YJ5 346 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 FAM181AQ8N9Y4 354 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 ZNF548Q8NEK5 533 aaPredicted RBP12.56□□□□□ -0.4
CCNL1-213ENST00000471044 OR8K1Q8NGG5 319 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 ZNF564Q8TBZ8 553 aaPredicted RBP12.56□□□□□ -0.4
CCNL1-213ENST00000471044 MDM1Q8TC05 714 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 BTN2A2Q8WVV5 523 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 RFFLQ8WZ73 363 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms