RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 RPS21P63220 83 aaKnown RBP12.68□□□□□ -0.38
SND1-209ENST00000470723 RALGDSQ12967 914 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 CBLBQ13191 982 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 PTK6Q13882 451 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 SIRPB2Q5JXA9 342 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 CFAP58Q5T655 872 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 KIAA0895LQ68EN5 471 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 TBC1D3GQ6DHY5 549 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 TBC1D3CQ6IPX1 549 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 KIAA1161Q6NSJ0 714 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 CCDC70Q6NSX1 233 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 LIPIQ6XZB0 460 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 LINC00523Q86TU6 105 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 FAM124AQ86V42 546 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 NLRP8Q86W28 1048 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 CACUL1Q86Y37 369 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 KLHL7Q8IXQ5 586 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 TBC1D3Q8IZP1 549 aaPredicted RBP12.68□□□□□ -0.38
SND1-209ENST00000470723 MMGT1Q8N4V1 131 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 PDCD7Q8N8D1 485 aaKnown RBP12.68□□□□□ -0.38
SND1-209ENST00000470723 MCUQ8NE86 351 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 MNS1Q8NEH6 495 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 C1orf216Q8TAB5 229 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 PDCD6IPQ8WUM4 868 aaKnown RBP12.68□□□□□ -0.38
SND1-209ENST00000470723 FOXJ1Q92949 421 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 IFT43Q96FT9 208 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 LOXL4Q96JB6 756 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 LENG8Q96PV6 779 aaPredicted RBP12.68□□□□□ -0.38
SND1-209ENST00000470723 PHOX2BQ99453 314 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 KRT12Q99456 494 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 ORAI3Q9BRQ5 295 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 GPR174Q9BXC1 333 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 EPC1Q9H2F5 836 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 C6orf106Q9H6K1 298 aaPredicted RBP12.68□□□□□ -0.38
SND1-209ENST00000470723 LRRC40Q9H9A6 602 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 ZFR2Q9UPR6 939 aaKnown RBP12.68□□□□□ -0.38
SND1-209ENST00000470723 INVSQ9Y283 1065 aa12.68□□□□□ -0.38
SND1-209ENST00000470723 USP34Q70CQ2 3546 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 CAPN8A6NHC0 703 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 PSMD11O00231 422 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 MAP3K13O43283 966 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 RHOBTB1O94844 696 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 FGF1P05230 155 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 IGHV4-34P06331 123 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 ZNF30P17039 623 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 TPSB2P20231 275 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 XPAP23025 273 aaPredicted RBP12.67□□□□□ -0.38
SND1-209ENST00000470723 PSMA3P25788 255 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 VIPR1P32241 457 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 NBL1P41271 181 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 DRG2P55039 364 aaKnown RBP12.67□□□□□ -0.38
SND1-209ENST00000470723 DR1Q01658 176 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 PTSQ03393 145 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 GPS1Q13098 491 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 SRSF5Q13243 272 aaKnown RBP12.67□□□□□ -0.38
SND1-209ENST00000470723 KCNJ11Q14654 390 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 TPSAB1Q15661 275 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 ZNF284Q2VY69 593 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 PMS2CLQ68D20 193 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 NAPEPLDQ6IQ20 393 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 ZC3H14Q6PJT7 736 aaKnown RBP12.67□□□□□ -0.38
SND1-209ENST00000470723 CRTC1Q6UUV9 634 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 USP45Q70EL2 814 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 LPCAT2Q7L5N7 544 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 ERMP1Q7Z2K6 904 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 TMC3Q7Z5M5 1100 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 HORMAD1Q86X24 394 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 SLC41A1Q8IVJ1 513 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 CEP112Q8N8E3 955 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 IPMKQ8NFU5 416 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 LRRC45Q96CN5 670 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 TBL1YQ9BQ87 522 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 TRABDQ9H4I3 376 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 KCTD5Q9NXV2 234 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 B4GALT6Q9UBX8 382 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.67□□□□□ -0.38
SND1-209ENST00000470723 MYO15AQ9UKN7 3530 aa12.67□□□□□ -0.38
SND1-209ENST00000470723 KNL1Q8NG31 2342 aa12.66□□□□□ -0.38
SND1-209ENST00000470723 A0A1W2PQU0 124 aa12.66□□□□□ -0.38
SND1-209ENST00000470723 RGSL1A5PLK6 1076 aa12.66□□□□□ -0.38
SND1-209ENST00000470723 NPIPB15A6NHN6 443 aaPredicted RBP12.66□□□□□ -0.38
SND1-209ENST00000470723 BHMG1C9JSJ3 638 aaPredicted RBP12.66□□□□□ -0.38
SND1-209ENST00000470723 PROB1E7EW31 1015 aa12.66□□□□□ -0.38
SND1-209ENST00000470723 AP3B1O00203 1094 aa12.66□□□□□ -0.38
SND1-209ENST00000470723 RNGTTO60942 597 aaKnown RBP12.66□□□□□ -0.38
SND1-209ENST00000470723 HEXIM1O94992 359 aaKnown RBP12.66□□□□□ -0.38
SND1-209ENST00000470723 PCDH8O95206 1070 aa12.66□□□□□ -0.38
SND1-209ENST00000470723 GM2AP17900 193 aa12.66□□□□□ -0.38
SND1-209ENST00000470723 EPHB1P54762 984 aa12.66□□□□□ -0.38
SND1-209ENST00000470723 FAM193AP78312 1265 aa12.66□□□□□ -0.38
SND1-209ENST00000470723 RPL6Q02878 288 aaKnown RBP12.66□□□□□ -0.38
SND1-209ENST00000470723 SIM2Q14190 667 aaPredicted RBP12.66□□□□□ -0.38
SND1-209ENST00000470723 PPP1R7Q15435 360 aa12.66□□□□□ -0.38
SND1-209ENST00000470723 TRIP13Q15645 432 aaPredicted RBP12.66□□□□□ -0.38
SND1-209ENST00000470723 PCSK7Q16549 785 aa12.66□□□□□ -0.38
SND1-209ENST00000470723 ARMC3Q5W041 872 aa12.66□□□□□ -0.38
SND1-209ENST00000470723 CYP2U1Q7Z449 544 aa12.66□□□□□ -0.38
SND1-209ENST00000470723 KDELC2Q7Z4H8 507 aa12.66□□□□□ -0.38
SND1-209ENST00000470723 TECPR1Q7Z6L1 1165 aa12.66□□□□□ -0.38
SND1-209ENST00000470723 PCGF5Q86SE9 256 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms