RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 TBPL2Q6SJ96 375 aa9.58□□□□□ -0.88
NHLRC3-203ENST00000470258 CCDC81Q6ZN84 652 aa9.58□□□□□ -0.88
NHLRC3-203ENST00000470258 NIPA1Q7RTP0 329 aa9.58□□□□□ -0.88
NHLRC3-203ENST00000470258 STK32CQ86UX6 486 aa9.58□□□□□ -0.88
NHLRC3-203ENST00000470258 RETREG3Q86VR2 466 aa9.58□□□□□ -0.88
NHLRC3-203ENST00000470258 ARMC8Q8IUR7 673 aa9.58□□□□□ -0.88
NHLRC3-203ENST00000470258 SCML4Q8N228 414 aa9.58□□□□□ -0.88
NHLRC3-203ENST00000470258 C12orf29Q8N999 325 aa9.58□□□□□ -0.88
NHLRC3-203ENST00000470258 PSD4Q8NDX1 1056 aa9.58□□□□□ -0.88
NHLRC3-203ENST00000470258 NDNFQ8TB73 568 aa9.58□□□□□ -0.88
NHLRC3-203ENST00000470258 DNAJB14Q8TBM8 379 aa9.58□□□□□ -0.88
NHLRC3-203ENST00000470258 RMND5AQ9H871 391 aa9.58□□□□□ -0.88
NHLRC3-203ENST00000470258 PRELID1Q9Y255 219 aa9.58□□□□□ -0.88
NHLRC3-203ENST00000470258 MTF2Q9Y483 593 aaPredicted RBP9.58□□□□□ -0.88
NHLRC3-203ENST00000470258 GPSM3Q9Y4H4 160 aa9.58□□□□□ -0.88
NHLRC3-203ENST00000470258 ACOX3O15254 700 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 MGEA5O60502 916 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 ICAM1P05362 532 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 CYP3A5P20815 502 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 CES1P23141 567 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 GJA9P57773 515 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 VBP1P61758 197 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 YBX1P67809 324 aaKnown RBP9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 DGKZQ13574 1117 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 E2F2Q14209 437 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 HSDL1Q3SXM5 330 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 CATSPER4Q7RTX7 472 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 COLGALT2Q8IYK4 626 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 TTC30BQ8N4P2 665 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 AFAP1L2Q8N4X5 818 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 ATP6V0D2Q8N8Y2 350 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 S100ZQ8WXG8 99 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 HDAC11Q96DB2 347 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 TMEM176AQ96HP8 235 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 CSPG4P5Q96PW8 444 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 PDCD2LQ9BRP1 358 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 HOXD1Q9GZZ0 328 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 TNFRSF12AQ9NP84 129 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 AKIP1Q9NQ31 210 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 SCUBE2Q9NQ36 999 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 CHST12Q9NRB3 414 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 ACOT9Q9Y305 439 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 ADGRA2Q96PE1 1338 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 TRIM64A6NGJ6 449 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 CCRL2O00421 344 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 TBX1O43435 398 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 MFSD11O43934 449 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 FARP2O94887 1054 aaPredicted RBP9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 SEC24AO95486 1093 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 UGT2B4P06133 528 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 YBX3P16989 372 aaKnown RBP eCLIP9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 BMPR1AP36894 532 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 LEPRP48357 1165 aaKnown RBP9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 CLK3P49761 638 aaKnown RBP9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 RPS6KA2Q15349 733 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 MEP1AQ16819 746 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 FAM83EQ2M2I3 478 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 ZNF280DQ6N043 979 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 PAGE2Q7Z2X7 111 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 FAM160B2Q86V87 743 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 ADGRG5Q8IZF4 528 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 SPARTQ8N0X7 666 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 ELMOD1Q8N336 334 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 TXNDC5Q8NBS9 432 aaKnown RBP9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 SMG8Q8ND04 991 aaKnown RBP9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 TRPV3Q8NET8 790 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 PNPT1Q8TCS8 783 aaKnown RBP9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 CLEC4DQ8WXI8 215 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 ELMO1Q92556 727 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 MAGED4Q96JG8 741 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 CEP295NLQ96MC4 621 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 XYLT2Q9H1B5 865 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 PDZD7Q9H5P4 517 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 TSPAN16Q9UKR8 245 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 STYXL1Q9Y6J8 313 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 PTPRFP10586 1907 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 TRIM64BA6NI03 449 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 SYCE1LA8MT33 242 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 AXIN1O15169 862 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 RAD51BO15315 384 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 NUAK1O60285 661 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 DAB1O75553 588 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 PTPN2P17706 415 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 ARL4AP40617 200 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 CTBP1Q13363 440 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 LRIT3Q3SXY7 679 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 STYK1Q6J9G0 422 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 LINC00523Q86TU6 105 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 FAM131BQ86XD5 332 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 GATAD2AQ86YP4 633 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 TP53INP2Q8IXH6 220 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 MINDY2Q8NBR6 621 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 STYXQ8WUJ0 223 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 EXT2Q93063 718 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 PDGFDQ9GZP0 370 aaPredicted RBP9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 JPH1Q9HDC5 661 aaPredicted RBP9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 NUDT5Q9UKK9 219 aa9.57□□□□□ -0.88
NHLRC3-203ENST00000470258 A0A0J9YYE9 177 aa9.56□□□□□ -0.88
NHLRC3-203ENST00000470258 SNX2O60749 519 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms