RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.82□□□□□ -1.48
UBE3C-204ENST00000469336 ADGRF4Q8IZF3 695 aa5.82□□□□□ -1.48
UBE3C-204ENST00000469336 TMEM217Q8N7C4 229 aa5.82□□□□□ -1.48
UBE3C-204ENST00000469336 SCAIQ8N9R8 606 aa5.82□□□□□ -1.48
UBE3C-204ENST00000469336 SETD9Q8NE22 299 aa5.82□□□□□ -1.48
UBE3C-204ENST00000469336 TBC1D22AQ8WUA7 517 aa5.82□□□□□ -1.48
UBE3C-204ENST00000469336 RAB40AQ8WXH6 277 aa5.82□□□□□ -1.48
UBE3C-204ENST00000469336 KAT2AQ92830 837 aa5.82□□□□□ -1.48
UBE3C-204ENST00000469336 SMARCE1Q969G3 411 aa5.82□□□□□ -1.48
UBE3C-204ENST00000469336 RPGRIP1Q96KN7 1286 aa5.82□□□□□ -1.48
UBE3C-204ENST00000469336 TEFMQ96QE5 360 aaKnown RBP5.82□□□□□ -1.48
UBE3C-204ENST00000469336 CLSTN3Q9BQT9 956 aa5.82□□□□□ -1.48
UBE3C-204ENST00000469336 SCNM1Q9BWG6 230 aa5.82□□□□□ -1.48
UBE3C-204ENST00000469336 QTRT1Q9BXR0 403 aaKnown RBP5.82□□□□□ -1.48
UBE3C-204ENST00000469336 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.82□□□□□ -1.48
UBE3C-204ENST00000469336 INTS2Q9H0H0 1204 aaKnown RBP5.82□□□□□ -1.48
UBE3C-204ENST00000469336 LMAN2LQ9H0V9 348 aa5.82□□□□□ -1.48
UBE3C-204ENST00000469336 BEX4Q9NWD9 120 aaPredicted RBP5.82□□□□□ -1.48
UBE3C-204ENST00000469336 FBXO40Q9UH90 709 aa5.82□□□□□ -1.48
UBE3C-204ENST00000469336 HOOK1Q9UJC3 728 aaKnown RBP5.82□□□□□ -1.48
UBE3C-204ENST00000469336 USP16Q9Y5T5 823 aa5.82□□□□□ -1.48
UBE3C-204ENST00000469336 MYO5BQ9ULV0 1848 aa5.82□□□□□ -1.48
UBE3C-204ENST00000469336 UTYO14607 1347 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 SALL1Q9NSC2 1324 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 A0A087WUV0 522 aaPredicted RBP5.81□□□□□ -1.48
UBE3C-204ENST00000469336 DPPA5A6NC42 116 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 OR6C68A6NDL8 312 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 GAGE10A6NGK3 116 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 E5RJQ4 531 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 TP73O15350 636 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 CNOT3O75175 753 aaKnown RBP5.81□□□□□ -1.48
UBE3C-204ENST00000469336 CHRM4P08173 479 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 FCGR2AP12318 317 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 KRT9P35527 623 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 ARHGAP25P42331 645 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 MYL5Q02045 173 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 ID2Q02363 134 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 CAMK1Q14012 370 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 NAA25Q14CX7 972 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 NFIL3Q16649 462 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 WHAMMP3Q1A5X7 153 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 SLC4A8Q2Y0W8 1093 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 SUPT20HL1Q3ZLR7 823 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 MCM10Q7L590 875 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 G2E3Q7L622 706 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 ADGRG6Q86SQ4 1221 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 VSTM4Q8IW00 320 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 DDIASQ8IXT1 998 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 NEK11Q8NG66 645 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 ZCCHC10Q8TBK6 192 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 HDAC7Q8WUI4 952 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 CUL5Q93034 780 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 ZBTB10Q96DT7 871 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 ELP4Q96EB1 424 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 RNF125Q96EQ8 232 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 CCDC51Q96ER9 411 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 RRP36Q96EU6 259 aaKnown RBP5.81□□□□□ -1.48
UBE3C-204ENST00000469336 ZNF274Q96GC6 653 aaPredicted RBP5.81□□□□□ -1.48
UBE3C-204ENST00000469336 TUBB6Q9BUF5 446 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.81□□□□□ -1.48
UBE3C-204ENST00000469336 IFT27Q9BW83 186 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 C1QTNF7Q9BXJ2 289 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 XPO4Q9C0E2 1151 aaKnown RBP5.81□□□□□ -1.48
UBE3C-204ENST00000469336 PRSS22Q9GZN4 317 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 PAIP1Q9H074 479 aaKnown RBP5.81□□□□□ -1.48
UBE3C-204ENST00000469336 PREBQ9HCU5 417 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 TMEM45AQ9NWC5 275 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 TRMT1Q9NXH9 659 aaKnown RBP5.81□□□□□ -1.48
UBE3C-204ENST00000469336 STK26Q9P289 416 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 SLC25A10Q9UBX3 287 aaPredicted RBP5.81□□□□□ -1.48
UBE3C-204ENST00000469336 ZNF70Q9UC06 446 aaPredicted RBP5.81□□□□□ -1.48
UBE3C-204ENST00000469336 TUBE1Q9UJT0 475 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 AGO2Q9UKV8 859 aaKnown RBP5.81□□□□□ -1.48
UBE3C-204ENST00000469336 ARHGAP26Q9UNA1 814 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 RIMS1Q86UR5 1692 aaKnown RBP5.81□□□□□ -1.48
UBE3C-204ENST00000469336 KDM6AO15550 1401 aaPredicted RBP5.81□□□□□ -1.48
UBE3C-204ENST00000469336 USP6P35125 1406 aa5.81□□□□□ -1.48
UBE3C-204ENST00000469336 WDR19Q8NEZ3 1342 aa5.8□□□□□ -1.48
UBE3C-204ENST00000469336 RICTORQ6R327 1708 aa5.8□□□□□ -1.48
UBE3C-204ENST00000469336 PEAK1Q9H792 1746 aa5.8□□□□□ -1.48
UBE3C-204ENST00000469336 KIR2DS5A0A0G2JLQ3 304 aa5.8□□□□□ -1.48
UBE3C-204ENST00000469336 TMCO5BA8MYB1 307 aa5.8□□□□□ -1.48
UBE3C-204ENST00000469336 KIR2DS3K7RE56 304 aa5.8□□□□□ -1.48
UBE3C-204ENST00000469336 RHODO00212 210 aa5.8□□□□□ -1.48
UBE3C-204ENST00000469336 PRPF4O43172 522 aaKnown RBP eCLIP5.8□□□□□ -1.48
UBE3C-204ENST00000469336 DDAH2O95865 285 aa5.8□□□□□ -1.48
UBE3C-204ENST00000469336 TOP1P11387 765 aaKnown RBP5.8□□□□□ -1.48
UBE3C-204ENST00000469336 CMA1P23946 247 aa5.8□□□□□ -1.48
UBE3C-204ENST00000469336 CALRP27797 417 aaKnown RBP5.8□□□□□ -1.48
UBE3C-204ENST00000469336 SKIV2L2P42285 1042 aaKnown RBP5.8□□□□□ -1.48
UBE3C-204ENST00000469336 LMAN1P49257 510 aa5.8□□□□□ -1.48
UBE3C-204ENST00000469336 GSCP56915 257 aaPredicted RBP5.8□□□□□ -1.48
UBE3C-204ENST00000469336 RPP30P78346 268 aaKnown RBP5.8□□□□□ -1.48
UBE3C-204ENST00000469336 TAF7Q15545 349 aaPredicted RBP5.8□□□□□ -1.48
UBE3C-204ENST00000469336 PRICKLE4Q2TBC4 344 aa5.8□□□□□ -1.48
UBE3C-204ENST00000469336 MIDNQ504T8 468 aa5.8□□□□□ -1.48
UBE3C-204ENST00000469336 DNAJC21Q5F1R6 531 aaKnown RBP5.8□□□□□ -1.48
UBE3C-204ENST00000469336 ZNF766Q5HY98 468 aa5.8□□□□□ -1.48
UBE3C-204ENST00000469336 TTC39AQ5SRH9 613 aa5.8□□□□□ -1.48
UBE3C-204ENST00000469336 BEND3Q5T5X7 828 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms