RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 MRM3Q9HC36 420 aaKnown RBP12.89□□□□□ -0.35
RUNX1-213ENST00000469087 PRSS16Q9NQE7 514 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 TREX1Q9NSU2 369 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.89□□□□□ -0.35
RUNX1-213ENST00000469087 SUN2Q9UH99 717 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 RPL26L1Q9UNX3 145 aaKnown RBP12.89□□□□□ -0.35
RUNX1-213ENST00000469087 A0A0J9YYE9 177 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 POC1B-GALNT4F8VUJ3 575 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 RASGRF2O14827 1237 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 TCEA3O75764 348 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 TRBC1P01850 177 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 ERVK-10P10266 1014 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 STX2P32856 288 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 HNF1BP35680 557 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 ZP2Q05996 745 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 SMAD1Q15797 465 aaKnown RBP12.89□□□□□ -0.35
RUNX1-213ENST00000469087 MICALCLQ6ZW33 695 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 PAF1Q8N7H5 531 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 OR13J1Q8NGT2 312 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 SPOCK2Q92563 424 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 EID2BQ96D98 161 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 MRRFQ96E11 262 aaKnown RBP12.89□□□□□ -0.35
RUNX1-213ENST00000469087 RUFY1Q96T51 708 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 CYTH2Q99418 400 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 SH3GL2Q99962 352 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 ROPN1BQ9BZX4 212 aaPredicted RBP12.89□□□□□ -0.35
RUNX1-213ENST00000469087 ACBD3Q9H3P7 528 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 ROPN1Q9HAT0 212 aaPredicted RBP12.89□□□□□ -0.35
RUNX1-213ENST00000469087 MAGEE1Q9HCI5 957 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 PPM1HQ9ULR3 514 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 PHTF1Q9UMS5 762 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 PPIL1Q9Y3C6 166 aa12.89□□□□□ -0.35
RUNX1-213ENST00000469087 EXOC1LA0A1B0GW35 172 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 FAM159BA6NKW6 160 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 SMIM23A6NLE4 172 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 PAPSS2O95340 614 aaPredicted RBP12.88□□□□□ -0.35
RUNX1-213ENST00000469087 DRD1P21728 446 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 ARNTP27540 789 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 ARCN1P48444 511 aaKnown RBP12.88□□□□□ -0.35
RUNX1-213ENST00000469087 METAP1P53582 386 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 GRSF1Q12849 480 aaKnown RBP eCLIP12.88□□□□□ -0.35
RUNX1-213ENST00000469087 TAF1AQ15573 450 aaPredicted RBP12.88□□□□□ -0.35
RUNX1-213ENST00000469087 CDKN3Q16667 212 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 KRT71Q3SY84 523 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 POM121L1PQ3SYA9 428 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 ZNF805Q5CZA5 627 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 ARMC3Q5W041 872 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 TMIEQ8NEW7 156 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 OR13C4Q8NGS5 318 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 FAM3CQ92520 227 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 ARL8AQ96BM9 186 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 SCRN2Q96FV2 425 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 CERS2Q96G23 380 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 OSBPL1AQ9BXW6 950 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 PPANQ9NQ55 473 aaKnown RBP12.88□□□□□ -0.35
RUNX1-213ENST00000469087 VPS18Q9P253 973 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 DUSP12Q9UNI6 340 aa12.88□□□□□ -0.35
RUNX1-213ENST00000469087 A8MX80 341 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 GOLGA8KD6RF30 607 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 GOLGA8TH3BQL2 631 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 CCL22O00626 93 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 NPC1O15118 1278 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 VAPBO95292 243 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 CRTAMO95727 393 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 ARSDP51689 593 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 POLR2LP62875 67 aaKnown RBP12.87□□□□□ -0.35
RUNX1-213ENST00000469087 SEMG2Q02383 582 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 FRG1Q14331 258 aaKnown RBP12.87□□□□□ -0.35
RUNX1-213ENST00000469087 ELAVL3Q14576 367 aaKnown RBP12.87□□□□□ -0.35
RUNX1-213ENST00000469087 UGP2Q16851 508 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 KLHL38Q2WGJ6 581 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 LRRC73Q5JTD7 316 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 TPRG1Q6ZUI0 275 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 NLRP9Q7RTR0 991 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 GLT6D1Q7Z4J2 308 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 CTAGE3PQ8IX95 158 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 TTC30BQ8N4P2 665 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 IL17RCQ8NAC3 791 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 OR8D1Q8WZ84 308 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 TMBIM4Q9HC24 238 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 C20orf96Q9NUD7 363 aaPredicted RBP12.87□□□□□ -0.35
RUNX1-213ENST00000469087 FAM53CQ9NYF3 392 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 EURLQ9NYK6 297 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 HACD3Q9P035 362 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 CTNNAL1Q9UBT7 734 aa12.87□□□□□ -0.35
RUNX1-213ENST00000469087 A0A1W2PQ67 120 aa12.86□□□□□ -0.35
RUNX1-213ENST00000469087 NPIPB15A6NHN6 443 aaPredicted RBP12.86□□□□□ -0.35
RUNX1-213ENST00000469087 C2orf81A6NN90 581 aa12.86□□□□□ -0.35
RUNX1-213ENST00000469087 OPA1O60313 960 aa12.86□□□□□ -0.35
RUNX1-213ENST00000469087 UGT1A9O60656 530 aa12.86□□□□□ -0.35
RUNX1-213ENST00000469087 CLDN7O95471 211 aa12.86□□□□□ -0.35
RUNX1-213ENST00000469087 PRNPP04156 253 aa12.86□□□□□ -0.35
RUNX1-213ENST00000469087 TIMP2P16035 220 aa12.86□□□□□ -0.35
RUNX1-213ENST00000469087 TMPRSS15P98073 1019 aa12.86□□□□□ -0.35
RUNX1-213ENST00000469087 ACVR1Q04771 509 aa12.86□□□□□ -0.35
RUNX1-213ENST00000469087 MGAT5Q09328 741 aa12.86□□□□□ -0.35
RUNX1-213ENST00000469087 LAMB3Q13751 1172 aa12.86□□□□□ -0.35
RUNX1-213ENST00000469087 SKIDA1Q1XH10 827 aa12.86□□□□□ -0.35
RUNX1-213ENST00000469087 HSP90AA5PQ58FG0 334 aa12.86□□□□□ -0.35
RUNX1-213ENST00000469087 BRAT1Q6PJG6 821 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms