RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 SAP25Q8TEE9 199 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 KLK6Q92876 244 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 CENPTQ96BT3 561 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 KLHDC7BQ96G42 594 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 CAMK1GQ96NX5 476 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 TSGA13Q96PP4 275 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 MGME1Q9BQP7 344 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 CINPQ9BW66 212 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-205ENST00000468338 ITM2BQ9Y287 266 aa11.25□□□□□ -0.61
COL4A6-205ENST00000468338 COL5A1P20908 1838 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-205ENST00000468338 A0A0A6YYK5 440 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-205ENST00000468338 IGLON5A6NGN9 336 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 YKT6O15498 198 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 HTRA2O43464 458 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-205ENST00000468338 MFSD11O43934 449 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 IL2RAP01589 272 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 ITIH2P19823 946 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 GARSP41250 739 aaKnown RBP11.24□□□□□ -0.61
COL4A6-205ENST00000468338 SLC10A2Q12908 348 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-205ENST00000468338 TRIP6Q15654 476 aaKnown RBP11.24□□□□□ -0.61
COL4A6-205ENST00000468338 TAZQ16635 292 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 RALGPS1Q5JS13 557 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 PRAMEF14Q5SWL7 426 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 ALG1LQ6GMV1 187 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 KYAT3Q6YP21 454 aaKnown RBP11.24□□□□□ -0.61
COL4A6-205ENST00000468338 TMTC1Q8IUR5 882 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 ATPAF2Q8N5M1 289 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 MAML1Q92585 1016 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 IFT43Q96FT9 208 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 RNF157Q96PX1 679 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 NUDCD1Q96RS6 583 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 CALN1Q9BXU9 219 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 ATP13A3Q9H7F0 1226 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 FZD3Q9NPG1 666 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 KLHL11Q9NVR0 708 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 BTBD3Q9Y2F9 522 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 PCDHA13Q9Y5I0 950 aa11.24□□□□□ -0.61
COL4A6-205ENST00000468338 EPN1Q9Y6I3 576 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-205ENST00000468338 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.23□□□□□ -0.61
COL4A6-205ENST00000468338 SPAARA0A1B0GVQ0 90 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 SERTM1A2A2V5 107 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 CFAP69A5D8W1 941 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 POM121BA6NF01 834 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 THEGLP0DJG4 465 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 CCNCP24863 283 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 EPHA8P29322 1005 aaPredicted RBP11.23□□□□□ -0.61
COL4A6-205ENST00000468338 SERPINA4P29622 427 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 CYLC1P35663 651 aaPredicted RBP11.23□□□□□ -0.61
COL4A6-205ENST00000468338 MMP12P39900 470 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 GRK6P43250 576 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 ARRB1P49407 418 aaPredicted RBP11.23□□□□□ -0.61
COL4A6-205ENST00000468338 SCNN1BP51168 640 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 CLDN2P57739 230 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 PFN3P60673 137 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 SIM1P81133 766 aaPredicted RBP11.23□□□□□ -0.61
COL4A6-205ENST00000468338 GBE1Q04446 702 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 ELP6Q0PNE2 266 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 MARC1Q5VT66 337 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 SLC9A4Q6AI14 798 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 DCP2Q8IU60 420 aaKnown RBP11.23□□□□□ -0.61
COL4A6-205ENST00000468338 SLC22A18ASQ8N1D0 253 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 PLD5Q8N7P1 536 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 OR13H1Q8NG92 308 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 RHBDD1Q8TEB9 315 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 HDAC11Q96DB2 347 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 MRGPRX2Q96LB1 330 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 CDC6Q99741 560 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 PCDH12Q9NPG4 1184 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 TOR4AQ9NXH8 423 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 DTLQ9NZJ0 730 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 AMACRQ9UHK6 382 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 ZNF232Q9UNY5 417 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 ATP8A1Q9Y2Q0 1164 aa11.23□□□□□ -0.61
COL4A6-205ENST00000468338 A0A1W2PQ67 120 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 FAM221BA6H8Z2 402 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 A6NNZ2 444 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 TMEM110-MUSTN1A8MSY1 372 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 NEMP1O14524 444 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 MMP20O60882 483 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 SOCS5O75159 536 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 TM7SF2O76062 418 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 NDUFA10O95299 355 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 MX2P20592 715 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 COMTP21964 271 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 CDC25BP30305 580 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 GJC1P36383 396 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 SLC19A1P41440 591 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 MMP13P45452 471 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 POLR2LP62875 67 aaKnown RBP11.22□□□□□ -0.61
COL4A6-205ENST00000468338 BCL2L1Q07817 233 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 RALGDSQ12967 914 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 BNIP3Q12983 259 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 SGCGQ13326 291 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 ZNF235Q14590 738 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 IHHQ14623 411 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 SPA17Q15506 151 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 IFI16Q16666 785 aaKnown RBP11.22□□□□□ -0.61
COL4A6-205ENST00000468338 LRRC73Q5JTD7 316 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 RAD9BQ6WBX8 426 aa11.22□□□□□ -0.61
COL4A6-205ENST00000468338 Q6ZSR6 202 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms