RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 CARD9Q9H257 536 aa20.13■□□□□ 0.81
NPHP4-206ENST00000468253 GLOD4Q9HC38 313 aa20.13■□□□□ 0.81
NPHP4-206ENST00000468253 FSCN3Q9NQT6 498 aa20.13■□□□□ 0.81
NPHP4-206ENST00000468253 PCDHGB2Q9Y5G2 931 aa20.13■□□□□ 0.81
NPHP4-206ENST00000468253 SNX11Q9Y5W9 270 aa20.13■□□□□ 0.81
NPHP4-206ENST00000468253 H7C0C1 242 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 CPP00450 1065 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 PRLP01236 227 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 CYP2A6P11509 494 aaPredicted RBP20.12■□□□□ 0.81
NPHP4-206ENST00000468253 ID4P47928 161 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 ATP5OP48047 213 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 NXPH1P58417 271 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 LRRC73Q5JTD7 316 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 AADACL2Q6P093 401 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 LIPIQ6XZB0 460 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 DBX2Q6ZNG2 339 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 RAVER1Q8IY67 606 aaKnown RBP20.12■□□□□ 0.81
NPHP4-206ENST00000468253 PDCD6IPQ8WUM4 868 aaKnown RBP20.12■□□□□ 0.81
NPHP4-206ENST00000468253 BMFQ96LC9 184 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 TDRD1Q9BXT4 1180 aaKnown RBP20.12■□□□□ 0.81
NPHP4-206ENST00000468253 FRMD8P1Q9BZ68 369 aaPredicted RBP20.12■□□□□ 0.81
NPHP4-206ENST00000468253 KCNF1Q9H3M0 494 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 GAREM1Q9H706 876 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 GDF3Q9NR23 364 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 SEPT10Q9P0V9 454 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 TTLL3Q9Y4R7 772 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 DMXL1Q9Y485 3027 aa20.12■□□□□ 0.81
NPHP4-206ENST00000468253 FPGTO14772 594 aa20.11■□□□□ 0.81
NPHP4-206ENST00000468253 PDHA1P08559 390 aa20.11■□□□□ 0.81
NPHP4-206ENST00000468253 RBP3P10745 1247 aa20.11■□□□□ 0.81
NPHP4-206ENST00000468253 CD86P42081 329 aa20.11■□□□□ 0.81
NPHP4-206ENST00000468253 RXRGP48443 463 aa20.11■□□□□ 0.81
NPHP4-206ENST00000468253 EIF3EP60228 445 aaKnown RBP20.11■□□□□ 0.81
NPHP4-206ENST00000468253 RALGDSQ12967 914 aa20.11■□□□□ 0.81
NPHP4-206ENST00000468253 USP45Q70EL2 814 aa20.11■□□□□ 0.81
NPHP4-206ENST00000468253 CDKL3Q8IVW4 592 aaPredicted RBP20.11■□□□□ 0.81
NPHP4-206ENST00000468253 REXO1L1PQ8IX06 675 aa20.11■□□□□ 0.81
NPHP4-206ENST00000468253 OXR1Q8N573 874 aa20.11■□□□□ 0.81
NPHP4-206ENST00000468253 WRAP53Q9BUR4 548 aaKnown RBP20.11■□□□□ 0.81
NPHP4-206ENST00000468253 ADGRE3Q9BY15 652 aa20.11■□□□□ 0.81
NPHP4-206ENST00000468253 PCDH9Q9HC56 1237 aa20.11■□□□□ 0.81
NPHP4-206ENST00000468253 DNPEPQ9ULA0 475 aa20.11■□□□□ 0.81
NPHP4-206ENST00000468253 PSMD11O00231 422 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 RAD51BO15315 384 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 LZTS3O60299 673 aaPredicted RBP20.1■□□□□ 0.81
NPHP4-206ENST00000468253 EPOP01588 193 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 C6P13671 934 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 RBL1P28749 1068 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 VIPR1P32241 457 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 RABIFP47224 123 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 YPEL5P62699 121 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 SUZ12Q15022 739 aaKnown RBP20.1■□□□□ 0.81
NPHP4-206ENST00000468253 KYAT3Q6YP21 454 aaKnown RBP20.1■□□□□ 0.81
NPHP4-206ENST00000468253 GCNT7Q6ZNI0 430 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 B4GALNT4Q76KP1 1039 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 PID1Q7Z2X4 250 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 IFT43Q96FT9 208 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 FCRL5Q96RD9 977 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 LYSMD1Q96S90 227 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 ELF4Q99607 663 aaPredicted RBP20.1■□□□□ 0.81
NPHP4-206ENST00000468253 TLR10Q9BXR5 811 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 USP29Q9HBJ7 922 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 B4GALT6Q9UBX8 382 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 CHKBQ9Y259 395 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 TRPM6Q9BX84 2022 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 CABIN1Q9Y6J0 2220 aa20.1■□□□□ 0.81
NPHP4-206ENST00000468253 A0A0J9YYE9 177 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 A6NNZ2 444 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 ANKRD66B4E2M5 251 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 YKT6O15498 198 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 HEXIM1O94992 359 aaKnown RBP20.09■□□□□ 0.81
NPHP4-206ENST00000468253 TRBC1P01850 177 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 PRKCGP05129 697 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 ELFN1P0C7U0 828 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 THEGLP0DJG4 465 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 CD68P34810 354 aaPredicted RBP20.09■□□□□ 0.81
NPHP4-206ENST00000468253 EPHB1P54762 984 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 PFN3P60673 137 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 LRRC14Q15048 493 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 SEL1L2Q5TEA6 688 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 DARS2Q6PI48 645 aaKnown RBP20.09■□□□□ 0.81
NPHP4-206ENST00000468253 Q6ZSR6 202 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 NLRP8Q86W28 1048 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 SPATS2Q86XZ4 545 aaKnown RBP20.09■□□□□ 0.81
NPHP4-206ENST00000468253 ZNF567Q8N184 647 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 TP53I13Q8NBR0 393 aaPredicted RBP20.09■□□□□ 0.81
NPHP4-206ENST00000468253 RBM15Q96T37 977 aaKnown RBP eCLIP20.09■□□□□ 0.81
NPHP4-206ENST00000468253 CEP41Q9BYV8 373 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 FZD3Q9NPG1 666 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 GPR27Q9NS67 375 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 JRKLQ9Y4A0 524 aa20.09■□□□□ 0.81
NPHP4-206ENST00000468253 A0A1B0GTQ1 180 aa20.08■□□□□ 0.81
NPHP4-206ENST00000468253 POM121BA6NF01 834 aa20.08■□□□□ 0.81
NPHP4-206ENST00000468253 PCDHGA12O60330 932 aa20.08■□□□□ 0.81
NPHP4-206ENST00000468253 STK10O94804 968 aaKnown RBP20.08■□□□□ 0.81
NPHP4-206ENST00000468253 ZNF30P17039 623 aa20.08■□□□□ 0.81
NPHP4-206ENST00000468253 CSRP1P21291 193 aaKnown RBP20.08■□□□□ 0.81
NPHP4-206ENST00000468253 HNF1BP35680 557 aa20.08■□□□□ 0.81
NPHP4-206ENST00000468253 CLDN2P57739 230 aa20.08■□□□□ 0.81
NPHP4-206ENST00000468253 CDK18Q07002 472 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms