RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 ALG6Q9Y672 507 aa11.6□□□□□ -0.55
CDHR3-205ENST00000468143 CNOT1A5YKK6 2376 aaKnown RBP11.59□□□□□ -0.55
CDHR3-205ENST00000468143 FAM221BA6H8Z2 402 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 RCCD1A6NED2 376 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 H3BM21 787 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 KCNK1O00180 336 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 APOL1O14791 398 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 SOCS5O75159 536 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 PGLSO95336 258 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 JCHAINP01591 159 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 PDHA1P08559 390 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 ALPIP09923 528 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 ELFN1P0C7U0 828 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 KRT10P13645 584 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 NME1P15531 152 aaKnown RBP11.59□□□□□ -0.55
CDHR3-205ENST00000468143 CKMT2P17540 419 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 GM2AP17900 193 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 MX2P20592 715 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 ACADVLP49748 655 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 HNRNPKP61978 463 aaKnown RBP eCLIP11.59□□□□□ -0.55
CDHR3-205ENST00000468143 YPEL5P62699 121 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 DAB2P98082 770 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 NIPAL4Q0D2K0 466 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 AP1B1Q10567 949 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 ZNF211Q13398 564 aaPredicted RBP11.59□□□□□ -0.55
CDHR3-205ENST00000468143 PTK2BQ14289 1009 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 DEFB133Q30KQ1 61 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 PROX2Q3B8N5 592 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 HS1BP3Q53T59 392 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 ARMC12Q5T9G4 340 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 LRRC38Q5VT99 294 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 KAZNQ674X7 775 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 MFSD7Q6UXD7 560 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 RAD9BQ6WBX8 426 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 CCNI2Q6ZMN8 369 aaPredicted RBP11.59□□□□□ -0.55
CDHR3-205ENST00000468143 TMPRSS7Q7RTY8 843 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 RD3Q7Z3Z2 195 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 CCDC13Q8IYE1 715 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 PHACTR4Q8IZ21 702 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 PELI3Q8N2H9 469 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 OR4C6Q8NH72 309 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 TSACCQ96A04 125 aaPredicted RBP11.59□□□□□ -0.55
CDHR3-205ENST00000468143 IFT43Q96FT9 208 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 PANX2Q96RD6 677 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 CEP41Q9BYV8 373 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 POLR1EQ9GZS1 481 aaKnown RBP11.59□□□□□ -0.55
CDHR3-205ENST00000468143 DDX56Q9NY93 547 aaKnown RBP11.59□□□□□ -0.55
CDHR3-205ENST00000468143 SAE1Q9UBE0 346 aaPredicted RBP11.59□□□□□ -0.55
CDHR3-205ENST00000468143 SALL4Q9UJQ4 1053 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 PHTF1Q9UMS5 762 aa11.59□□□□□ -0.55
CDHR3-205ENST00000468143 EPN1Q9Y6I3 576 aaPredicted RBP11.59□□□□□ -0.55
CDHR3-205ENST00000468143 CFAP69A5D8W1 941 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 NEMP2A6NFY4 417 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 NPIPB15A6NHN6 443 aaPredicted RBP11.58□□□□□ -0.56
CDHR3-205ENST00000468143 K7ESM1 405 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 AQP9O43315 295 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 GCATO75600 419 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 RFPL3O75679 317 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 NDUFA10O95299 355 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 HLA-DQB2P05538 268 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 PROS1P07225 676 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 LHCGRP22888 699 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 VIPR1P32241 457 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 PPARDQ03181 441 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 CNGA3Q16281 694 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 PRRT3Q5FWE3 981 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 KCTD16Q68DU8 428 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 SLC9A4Q6AI14 798 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 HSD11B1LQ7Z5J1 315 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 TSPAN33Q86UF1 283 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 TMTC1Q8IUR5 882 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 HID1Q8IV36 788 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 SPC24Q8NBT2 197 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 ZNF548Q8NEK5 533 aaPredicted RBP11.58□□□□□ -0.56
CDHR3-205ENST00000468143 TPCN2Q8NHX9 752 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 ARRDC2Q8TBH0 407 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 PIH1D2Q8WWB5 315 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 HDAC11Q96DB2 347 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 APOLD1Q96LR9 279 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 ZNF830Q96NB3 372 aaPredicted RBP11.58□□□□□ -0.56
CDHR3-205ENST00000468143 ANP32EQ9BTT0 268 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 SEPT10Q9P0V9 454 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 APOBEC3BQ9UH17 382 aaKnown RBP11.58□□□□□ -0.56
CDHR3-205ENST00000468143 CHKBQ9Y259 395 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 DUSP10Q9Y6W6 482 aa11.58□□□□□ -0.56
CDHR3-205ENST00000468143 PCNX2A6NKB5 2137 aa11.57□□□□□ -0.56
CDHR3-205ENST00000468143 A0A1W2PQ67 120 aa11.57□□□□□ -0.56
CDHR3-205ENST00000468143 FZD6O60353 706 aa11.57□□□□□ -0.56
CDHR3-205ENST00000468143 HEXIM1O94992 359 aaKnown RBP11.57□□□□□ -0.56
CDHR3-205ENST00000468143 CELA2BP08218 269 aaPredicted RBP11.57□□□□□ -0.56
CDHR3-205ENST00000468143 ALPPL2P10696 532 aa11.57□□□□□ -0.56
CDHR3-205ENST00000468143 CYP2A6P11509 494 aaPredicted RBP11.57□□□□□ -0.56
CDHR3-205ENST00000468143 HTR1BP28222 390 aa11.57□□□□□ -0.56
CDHR3-205ENST00000468143 HNF1BP35680 557 aa11.57□□□□□ -0.56
CDHR3-205ENST00000468143 ETV3P41162 512 aa11.57□□□□□ -0.56
CDHR3-205ENST00000468143 CDKN2BP42772 138 aa11.57□□□□□ -0.56
CDHR3-205ENST00000468143 MARCKSL1P49006 195 aa11.57□□□□□ -0.56
CDHR3-205ENST00000468143 EPHB1P54762 984 aa11.57□□□□□ -0.56
CDHR3-205ENST00000468143 HADHBP55084 474 aaKnown RBP11.57□□□□□ -0.56
CDHR3-205ENST00000468143 NAP1L1P55209 391 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms