RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 BCL2L1Q07817 233 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 PTK2BQ14289 1009 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 SOWAHCQ53LP3 525 aaPredicted RBP14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 MARC1Q5VT66 337 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 RAD9BQ6WBX8 426 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 PARGQ86W56 976 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 LRRC49Q8IUZ0 686 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 RHOT1Q8IXI2 618 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 LSMEM2Q8N112 164 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 SLC22A18ASQ8N1D0 253 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 BBS5Q8N3I7 341 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 PQLC3Q8N755 202 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 LSM14AQ8ND56 463 aaKnown RBP14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 TPCN2Q8NHX9 752 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 LRRN4Q8WUT4 740 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 RNF25Q96BH1 459 aaPredicted RBP14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 RNF157Q96PX1 679 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 DEPDC7Q96QD5 511 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 PSKH2Q96QS6 385 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 UBL7Q96S82 380 aaPredicted RBP14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 C1QTNF7Q9BXJ2 289 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 GOLPH3Q9H4A6 298 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 ATP13A3Q9H7F0 1226 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 IMPACTQ9P2X3 320 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 GGT7Q9UJ14 662 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 BPTFQ12830 3046 aa14.17□□□□□ -0.14
CCHCR1-211ENST00000467553 RCCD1A6NED2 376 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 EIF4E1BA6NMX2 242 aaKnown RBP14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 TK2O00142 265 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 TPP1O14773 563 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 LZTS3O60299 673 aaPredicted RBP14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 MMP20O60882 483 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 PEX11BO96011 259 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 KRT1P04264 644 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 GIMD1P0DJR0 217 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 HOXB3P14651 431 aaPredicted RBP14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 NME1P15531 152 aaKnown RBP14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 FECHP22830 423 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 SERPINA4P29622 427 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 HADHBP55084 474 aaKnown RBP14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 CLDN2P57739 230 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 MAXP61244 160 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 YPEL5P62699 121 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 SEMG2Q02383 582 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 ITKQ08881 620 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 IFI16Q16666 785 aaKnown RBP14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 LRRC38Q5VT99 294 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 ZCCHC8Q6NZY4 707 aaKnown RBP14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 PTAR1Q7Z6K3 402 aaPredicted RBP14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 RFX6Q8HWS3 928 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 PGBD5Q8N414 524 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 CCNYQ8ND76 341 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 ACRBPQ8NEB7 543 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 HCAR2Q8TDS4 363 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 FAF2Q96CS3 445 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 ZNF578Q96N58 590 aaPredicted RBP14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 ZNF641Q96N77 438 aaPredicted RBP14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 TUBGCP5Q96RT8 1024 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 NT5MQ9NPB1 228 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 DNAJC28Q9NX36 388 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 DDX56Q9NY93 547 aaKnown RBP14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 SALL4Q9UJQ4 1053 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 HEY1Q9Y5J3 304 aa14.16□□□□□ -0.14
CCHCR1-211ENST00000467553 A0A0A6YYK5 440 aaPredicted RBP14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 GOLGA6L6A8MZA4 724 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 AREL1O15033 823 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 NEBLO76041 1014 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 PRKCGP05129 697 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 HSPA9P38646 679 aaKnown RBP14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 GARSP41250 739 aaKnown RBP14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 MMP13P45452 471 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 GBE1Q04446 702 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 GALNT2Q10471 571 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 SLC10A2Q12908 348 aaPredicted RBP14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 FGL2Q14314 439 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 FZD2Q14332 565 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 LLGL1Q15334 1064 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 UGP2Q16851 508 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 TBC1D25Q3MII6 688 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 CDCP2Q5VXM1 449 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 MFSD7Q6UXD7 560 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 DAAM2Q86T65 1068 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 KIAA1328Q86T90 577 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 WDR48Q8TAF3 677 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 CXorf40AQ8TE69 158 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 GLMNQ92990 594 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 APOLD1Q96LR9 279 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 NSMCE3Q96MG7 304 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 DCBLD2Q96PD2 775 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 WRAP53Q9BUR4 548 aaKnown RBP14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 ABCG4Q9H172 646 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 UCKL1Q9NWZ5 548 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 REXO2Q9Y3B8 237 aaKnown RBP14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 DUSP10Q9Y6W6 482 aa14.15□□□□□ -0.14
CCHCR1-211ENST00000467553 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.14□□□□□ -0.15
CCHCR1-211ENST00000467553 POM121BA6NF01 834 aa14.14□□□□□ -0.15
CCHCR1-211ENST00000467553 C3orf70A6NLC5 250 aaPredicted RBP14.14□□□□□ -0.15
CCHCR1-211ENST00000467553 K7ESM1 405 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms