RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 E4F1Q66K89 784 aaPredicted RBP19.27■□□□□ 0.68
COL9A3-206ENST00000466532 LVRNQ6Q4G3 990 aa19.27■□□□□ 0.68
COL9A3-206ENST00000466532 IGF2-ASQ6U949 168 aa19.27■□□□□ 0.68
COL9A3-206ENST00000466532 CYP4V2Q6ZWL3 525 aaPredicted RBP19.27■□□□□ 0.68
COL9A3-206ENST00000466532 GKN2Q86XP6 184 aa19.27■□□□□ 0.68
COL9A3-206ENST00000466532 PSTKQ8IV42 348 aaKnown RBP19.27■□□□□ 0.68
COL9A3-206ENST00000466532 KYQ8NBH2 561 aa19.27■□□□□ 0.68
COL9A3-206ENST00000466532 ZNF653Q96CK0 615 aa19.27■□□□□ 0.68
COL9A3-206ENST00000466532 ECHDC3Q96DC8 303 aa19.27■□□□□ 0.68
COL9A3-206ENST00000466532 WDR92Q96MX6 357 aa19.27■□□□□ 0.68
COL9A3-206ENST00000466532 BPIFA3Q9BQP9 254 aa19.27■□□□□ 0.68
COL9A3-206ENST00000466532 AIPL1Q9NZN9 384 aa19.27■□□□□ 0.68
COL9A3-206ENST00000466532 TMEM63CQ9P1W3 806 aa19.27■□□□□ 0.68
COL9A3-206ENST00000466532 SCINQ9Y6U3 715 aa19.27■□□□□ 0.68
COL9A3-206ENST00000466532 MGAQ8IWI9 3026 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 CFAP69A5D8W1 941 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 SMTNL1A8MU46 457 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 TK2O00142 265 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 KLK10O43240 276 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 LRCH4O75427 683 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 TNFP01375 233 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 ELFN1P0C7U0 828 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 PRKCIP41743 596 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 SCNN1BP51168 640 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 TMPRSS3P57727 454 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 POLR2LP62875 67 aaKnown RBP19.26■□□□□ 0.67
COL9A3-206ENST00000466532 NSUN2Q08J23 767 aaKnown RBP eCLIP19.26■□□□□ 0.67
COL9A3-206ENST00000466532 KLHL30Q0D2K2 578 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 RFTN1Q14699 578 aaPredicted RBP19.26■□□□□ 0.67
COL9A3-206ENST00000466532 FOXR1Q6PIV2 292 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 SDR16C5Q8N3Y7 309 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 PLA2G15Q8NCC3 412 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 SLC46A1Q96NT5 459 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 CWC15Q9P013 229 aaKnown RBP19.26■□□□□ 0.67
COL9A3-206ENST00000466532 MYO1AQ9UBC5 1043 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 GPR34Q9UPC5 381 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 PCDHGA8Q9Y5G5 932 aa19.26■□□□□ 0.67
COL9A3-206ENST00000466532 ZFC3H1O60293 1989 aaKnown RBP19.25■□□□□ 0.67
COL9A3-206ENST00000466532 DDX3XO00571 662 aaKnown RBP eCLIP19.25■□□□□ 0.67
COL9A3-206ENST00000466532 RECQL5O94762 991 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-206ENST00000466532 HCAR3P49019 387 aa19.25■□□□□ 0.67
COL9A3-206ENST00000466532 ZNF135P52742 658 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-206ENST00000466532 PDX1P52945 283 aa19.25■□□□□ 0.67
COL9A3-206ENST00000466532 UCNP55089 124 aa19.25■□□□□ 0.67
COL9A3-206ENST00000466532 C19orf57Q0VDD7 668 aa19.25■□□□□ 0.67
COL9A3-206ENST00000466532 DPYSQ14117 519 aa19.25■□□□□ 0.67
COL9A3-206ENST00000466532 LIPIQ6XZB0 460 aa19.25■□□□□ 0.67
COL9A3-206ENST00000466532 DPPA4Q7L190 304 aa19.25■□□□□ 0.67
COL9A3-206ENST00000466532 TP53INP2Q8IXH6 220 aa19.25■□□□□ 0.67
COL9A3-206ENST00000466532 LSM14AQ8ND56 463 aaKnown RBP19.25■□□□□ 0.67
COL9A3-206ENST00000466532 WDR36Q8NI36 951 aaKnown RBP19.25■□□□□ 0.67
COL9A3-206ENST00000466532 CCDC74AQ96AQ1 378 aa19.25■□□□□ 0.67
COL9A3-206ENST00000466532 PDXPQ96GD0 296 aa19.25■□□□□ 0.67
COL9A3-206ENST00000466532 PRR11Q96HE9 360 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-206ENST00000466532 DPH1Q9BZG8 443 aa19.25■□□□□ 0.67
COL9A3-206ENST00000466532 ZWILCHQ9H900 591 aa19.25■□□□□ 0.67
COL9A3-206ENST00000466532 CPNE5Q9HCH3 593 aa19.25■□□□□ 0.67
COL9A3-206ENST00000466532 MRPL47Q9HD33 250 aaKnown RBP19.25■□□□□ 0.67
COL9A3-206ENST00000466532 CCDC187A0A096LP49 1063 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 A0A1W2PQC6 194 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 PMS2P1A4D2B8 440 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 CACNB4O00305 520 aaPredicted RBP19.24■□□□□ 0.67
COL9A3-206ENST00000466532 NTN3O00634 580 aaPredicted RBP19.24■□□□□ 0.67
COL9A3-206ENST00000466532 SKILP12757 684 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 RENBPP51606 427 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 KIAA1024LP59773 190 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 AP1S1P61966 158 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 SLC10A7Q0GE19 358 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 LBRQ14739 615 aaKnown RBP19.24■□□□□ 0.67
COL9A3-206ENST00000466532 TMCO4Q5TGY1 634 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 KCTD16Q68DU8 428 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 ARL14Q8N4G2 192 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 LZTR1Q8N653 840 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 FUBP1Q96AE4 644 aaKnown RBP19.24■□□□□ 0.67
COL9A3-206ENST00000466532 TRIM11Q96F44 468 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 PSKH2Q96QS6 385 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 RBM15Q96T37 977 aaKnown RBP eCLIP19.24■□□□□ 0.67
COL9A3-206ENST00000466532 SEPT3Q9UH03 358 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 RABGEF1Q9UJ41 708 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 DGKBQ9Y6T7 804 aa19.24■□□□□ 0.67
COL9A3-206ENST00000466532 A0A1B0GTH6 734 aa19.23■□□□□ 0.67
COL9A3-206ENST00000466532 TMEM202A6NGA9 273 aa19.23■□□□□ 0.67
COL9A3-206ENST00000466532 A8MX80 341 aa19.23■□□□□ 0.67
COL9A3-206ENST00000466532 H3BRJ5 948 aa19.23■□□□□ 0.67
COL9A3-206ENST00000466532 TRAFD1O14545 582 aaPredicted RBP19.23■□□□□ 0.67
COL9A3-206ENST00000466532 KALRNO60229 2985 aa19.23■□□□□ 0.67
COL9A3-206ENST00000466532 C1QL1O75973 258 aa19.23■□□□□ 0.67
COL9A3-206ENST00000466532 MYBL1P10243 752 aa19.23■□□□□ 0.67
COL9A3-206ENST00000466532 KELP23276 732 aa19.23■□□□□ 0.67
COL9A3-206ENST00000466532 SMTNL2Q2TAL5 461 aa19.23■□□□□ 0.67
COL9A3-206ENST00000466532 ARHGAP40Q5TG30 622 aa19.23■□□□□ 0.67
COL9A3-206ENST00000466532 OR56A4Q8NGH8 313 aa19.23■□□□□ 0.67
COL9A3-206ENST00000466532 OR1E3Q8WZA6 343 aa19.23■□□□□ 0.67
COL9A3-206ENST00000466532 NSMCE3Q96MG7 304 aa19.23■□□□□ 0.67
COL9A3-206ENST00000466532 ZNF599Q96NL3 588 aa19.23■□□□□ 0.67
COL9A3-206ENST00000466532 NAP1L5Q96NT1 182 aaPredicted RBP19.23■□□□□ 0.67
COL9A3-206ENST00000466532 GFM1Q96RP9 751 aaKnown RBP19.23■□□□□ 0.67
COL9A3-206ENST00000466532 MRPL40Q9NQ50 206 aaKnown RBP19.23■□□□□ 0.67
COL9A3-206ENST00000466532 ATMQ13315 3056 aa19.22■□□□□ 0.67
COL9A3-206ENST00000466532 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms