RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 NUDT1P36639 197 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 HSPA9P38646 679 aaKnown RBP9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 CSNK1DP48730 415 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 HADHBP55084 474 aaKnown RBP9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 SIM1P81133 766 aaPredicted RBP9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 NSUN2Q08J23 767 aaKnown RBP eCLIP9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 KIF5AQ12840 1032 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 BNIP3Q12983 259 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 ZBTB17Q13105 803 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 PDE1CQ14123 709 aaPredicted RBP9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 TCEAL1Q15170 157 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 PTPRRQ15256 657 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 IRF4Q15306 451 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 TCEA2Q15560 299 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 ZNF423Q2M1K9 1284 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 PROX2Q3B8N5 592 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 CCDC181Q5TID7 509 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 SLC9A4Q6AI14 798 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 BRAT1Q6PJG6 821 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 Q6ZSR6 202 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 TMEM145Q8NBT3 493 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 MNS1Q8NEH6 495 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 UBE2Q2Q8WVN8 375 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 HDAC11Q96DB2 347 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 BMFQ96LC9 184 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 ZNF641Q96N77 438 aaPredicted RBP9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 HEMGNQ9BXL5 484 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 POLR1EQ9GZS1 481 aaKnown RBP9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 MBNL1Q9NR56 388 aaKnown RBP9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 PACSIN2Q9UNF0 486 aaPredicted RBP9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 KNL1Q8NG31 2342 aa9.8□□□□□ -0.84
RTFDC1-205ENST00000466260 hCG_1818297A0A087WSY0 165 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 A0A0U1RQS6 177 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 TSPAN11A1L157 253 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 GRID2IPA4D2P6 1211 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 GOLGA6CA6NDK9 693 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 GOLGA6BA6NDN3 693 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 TRAFD1O14545 582 aaPredicted RBP9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 PPP1R12AO14974 1030 aaPredicted RBP9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 FLRT2O43155 660 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 ATP8B1O43520 1251 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 ZRANB2O95218 330 aaKnown RBP eCLIP9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 FTCDO95954 541 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 TOP3BO95985 862 aaKnown RBP9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 JCHAINP01591 159 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 ALPIP09923 528 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 ELFN1P0C7U0 828 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 GOLGA6DP0CG33 693 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 CEACAM1P13688 526 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 ZFXP17010 805 aaPredicted RBP9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 SPINK2P20155 84 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 EPHA8P29322 1005 aaPredicted RBP9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 MMP12P39900 470 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 CDKN2BP42772 138 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 ARRB1P49407 418 aaPredicted RBP9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 LIG3P49916 1009 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 THOP1P52888 689 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 EPHB1P54762 984 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 ADCY2Q08462 1091 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 PPIDQ08752 370 aaKnown RBP9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 RALGDSQ12967 914 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 SLC14A1Q13336 389 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 HNRNPDQ14103 355 aaKnown RBP9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 SUZ12Q15022 739 aaKnown RBP9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 ACOX1Q15067 660 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 SHBQ15464 509 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 TMEM52BQ4KMG9 183 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 TFDP3Q5H9I0 405 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 TPRG1LQ5T0D9 272 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 LRRC38Q5VT99 294 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 DMRTA1Q5VZB9 504 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 AADACL2Q6P093 401 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 KYAT3Q6YP21 454 aaKnown RBP9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 PIP4P1Q86T03 277 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 ZC3H18Q86VM9 953 aaKnown RBP9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 SLC22A18ASQ8N1D0 253 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 PNPLA1Q8N8W4 532 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 TP53I13Q8NBR0 393 aaPredicted RBP9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 MAML1Q92585 1016 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 RBM41Q96IZ5 413 aaKnown RBP9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 AGAP3Q96P47 875 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 SMIM14Q96QK8 99 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 KLF6Q99612 283 aaPredicted RBP9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 DNAJC28Q9NX36 388 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 GOLGA6AQ9NYA3 693 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 OGFRQ9NZT2 677 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 B4GALT6Q9UBX8 382 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 PCOLCE2Q9UKZ9 415 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 CHKBQ9Y259 395 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 RAI2Q9Y5P3 530 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 PTPRBP23467 1997 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 PCNX2A6NKB5 2137 aa9.79□□□□□ -0.84
RTFDC1-205ENST00000466260 CABIN1Q9Y6J0 2220 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 SCN8AQ9UQD0 1980 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 EFCAB8A8MWE9 144 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 SCAMP1O15126 338 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 FFAR2O15552 330 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 PJA2O43164 708 aa9.78□□□□□ -0.84
RTFDC1-205ENST00000466260 KIF5CO60282 957 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms