RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 RECQL5O94762 991 aaPredicted RBP21.88■■□□□ 1.09
LIME1-203ENST00000465591 PCCBP05166 539 aa21.88■■□□□ 1.09
LIME1-203ENST00000465591 CKMT1AP12532 417 aa21.88■■□□□ 1.09
LIME1-203ENST00000465591 DAB2P98082 770 aa21.88■■□□□ 1.09
LIME1-203ENST00000465591 GBE1Q04446 702 aa21.88■■□□□ 1.09
LIME1-203ENST00000465591 SLC10A2Q12908 348 aaPredicted RBP21.88■■□□□ 1.09
LIME1-203ENST00000465591 ILKQ13418 452 aa21.88■■□□□ 1.09
LIME1-203ENST00000465591 C1orf61Q13536 156 aa21.88■■□□□ 1.09
LIME1-203ENST00000465591 PTK2BQ14289 1009 aa21.88■■□□□ 1.09
LIME1-203ENST00000465591 INPP5AQ14642 412 aa21.88■■□□□ 1.09
LIME1-203ENST00000465591 DEFB133Q30KQ1 61 aa21.88■■□□□ 1.09
LIME1-203ENST00000465591 PELI3Q8N2H9 469 aa21.88■■□□□ 1.09
LIME1-203ENST00000465591 PAF1Q8N7H5 531 aa21.88■■□□□ 1.09
LIME1-203ENST00000465591 PDCD6IPQ8WUM4 868 aaKnown RBP21.88■■□□□ 1.09
LIME1-203ENST00000465591 SPOCK2Q92563 424 aa21.88■■□□□ 1.09
LIME1-203ENST00000465591 LRRC61Q9BV99 259 aa21.88■■□□□ 1.09
LIME1-203ENST00000465591 APOBEC3BQ9UH17 382 aaKnown RBP21.88■■□□□ 1.09
LIME1-203ENST00000465591 OR1A2Q9Y585 309 aa21.88■■□□□ 1.09
LIME1-203ENST00000465591 CFAP69A5D8W1 941 aa21.87■■□□□ 1.09
LIME1-203ENST00000465591 NEMP2A6NFY4 417 aa21.87■■□□□ 1.09
LIME1-203ENST00000465591 SOCS5O75159 536 aa21.87■■□□□ 1.09
LIME1-203ENST00000465591 MTA2O94776 668 aa21.87■■□□□ 1.09
LIME1-203ENST00000465591 CELA2BP08218 269 aaPredicted RBP21.87■■□□□ 1.09
LIME1-203ENST00000465591 KRT7P08729 469 aa21.87■■□□□ 1.09
LIME1-203ENST00000465591 KDELR1P24390 212 aa21.87■■□□□ 1.09
LIME1-203ENST00000465591 POLR2LP62875 67 aaKnown RBP21.87■■□□□ 1.09
LIME1-203ENST00000465591 INSM1Q01101 510 aaPredicted RBP21.87■■□□□ 1.09
LIME1-203ENST00000465591 PROSER1Q86XN7 944 aa21.87■■□□□ 1.09
LIME1-203ENST00000465591 CNGA4Q8IV77 575 aa21.87■■□□□ 1.09
LIME1-203ENST00000465591 TC2NQ8N9U0 490 aa21.87■■□□□ 1.09
LIME1-203ENST00000465591 FAM181AQ8N9Y4 354 aa21.87■■□□□ 1.09
LIME1-203ENST00000465591 MAML1Q92585 1016 aa21.87■■□□□ 1.09
LIME1-203ENST00000465591 FUBP1Q96AE4 644 aaKnown RBP21.87■■□□□ 1.09
LIME1-203ENST00000465591 APOOQ9BUR5 198 aa21.87■■□□□ 1.09
LIME1-203ENST00000465591 CLPBQ9H078 707 aa21.87■■□□□ 1.09
LIME1-203ENST00000465591 CCDC86Q9H6F5 360 aaKnown RBP21.87■■□□□ 1.09
LIME1-203ENST00000465591 CSNK1G3Q9Y6M4 447 aa21.87■■□□□ 1.09
LIME1-203ENST00000465591 URB1O60287 2271 aaKnown RBP21.86■■□□□ 1.09
LIME1-203ENST00000465591 COL27A1Q8IZC6 1860 aaPredicted RBP21.86■■□□□ 1.09
LIME1-203ENST00000465591 TOR1BO14657 336 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 ELFN1P0C7U0 828 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 ALPPL2P10696 532 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 CDK4P11802 303 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 JUPP14923 745 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 CNGA3Q16281 694 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 ALG11Q2TAA5 492 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 HS1BP3Q53T59 392 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 PRRT3Q5FWE3 981 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 FAM182AQ5T1J6 154 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 LRRC49Q8IUZ0 686 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 BBS5Q8N3I7 341 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 NSMCE1Q8WV22 266 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 RFFLQ8WZ73 363 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 TSACCQ96A04 125 aaPredicted RBP21.86■■□□□ 1.09
LIME1-203ENST00000465591 SMIM14Q96QK8 99 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 SEMA3CQ99985 751 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 TRIM5Q9C035 493 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 LCMT1Q9UIC8 334 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 HYOU1Q9Y4L1 999 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 CELSR3Q9NYQ7 3312 aa21.86■■□□□ 1.09
LIME1-203ENST00000465591 A0A0U1RQS6 177 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 C3orf70A6NLC5 250 aaPredicted RBP21.85■■□□□ 1.09
LIME1-203ENST00000465591 PGLSO95336 258 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 CPP00450 1065 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 LHCGRP22888 699 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 PEX5P50542 639 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 PPARDQ03181 441 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 TARDBPQ13148 414 aaKnown RBP eCLIP21.85■■□□□ 1.09
LIME1-203ENST00000465591 MTM1Q13496 603 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 NFATC4Q14934 902 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 TCEA2Q15560 299 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 FAXCQ5TGI0 409 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 MAP7D3Q8IWC1 876 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.85■■□□□ 1.09
LIME1-203ENST00000465591 BTN2A2Q8WVV5 523 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 COQ10AQ96MF6 247 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 TSGA13Q96PP4 275 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 RNF157Q96PX1 679 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 DUSP23Q9BVJ7 150 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 DTLQ9NZJ0 730 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 SPASTQ9UBP0 616 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 ZFYVE26Q68DK2 2539 aa21.85■■□□□ 1.09
LIME1-203ENST00000465591 DSPP15924 2871 aaKnown RBP21.85■■□□□ 1.09
LIME1-203ENST00000465591 ZFHX4Q86UP3 3567 aa21.84■■□□□ 1.09
LIME1-203ENST00000465591 LRRD1A4D1F6 860 aa21.84■■□□□ 1.09
LIME1-203ENST00000465591 MATN3O15232 486 aa21.84■■□□□ 1.09
LIME1-203ENST00000465591 PDHA1P08559 390 aa21.84■■□□□ 1.09
LIME1-203ENST00000465591 TSHRP16473 764 aa21.84■■□□□ 1.09
LIME1-203ENST00000465591 DSC2Q02487 901 aa21.84■■□□□ 1.09
LIME1-203ENST00000465591 CYP4F3Q08477 520 aa21.84■■□□□ 1.09
LIME1-203ENST00000465591 IFI16Q16666 785 aaKnown RBP21.84■■□□□ 1.09
LIME1-203ENST00000465591 RALGPS1Q5JS13 557 aa21.84■■□□□ 1.09
LIME1-203ENST00000465591 ZFYVE27Q5T4F4 411 aa21.84■■□□□ 1.09
LIME1-203ENST00000465591 ZCCHC8Q6NZY4 707 aaKnown RBP21.84■■□□□ 1.09
LIME1-203ENST00000465591 ENPP7Q6UWV6 458 aa21.84■■□□□ 1.09
LIME1-203ENST00000465591 HID1Q8IV36 788 aa21.84■■□□□ 1.09
LIME1-203ENST00000465591 RHOT2Q8IXI1 618 aa21.84■■□□□ 1.09
LIME1-203ENST00000465591 PLD5Q8N7P1 536 aa21.84■■□□□ 1.09
LIME1-203ENST00000465591 PIH1D2Q8WWB5 315 aa21.84■■□□□ 1.09
LIME1-203ENST00000465591 RAI2Q9Y5P3 530 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms