RNA–Protein interactions for RNA: ENST00000465582.5

SSBP1-205, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SSBP1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-205ENST00000465582 ZRANB2O95218 330 aaKnown RBP eCLIP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 PIGNO95427 931 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 IGSF6O95976 241 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 PEX11BO96011 259 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 GSRP00390 522 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 IL1BP01584 269 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 DNTTP04053 509 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 HOXA6P31267 233 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 PTPN7P35236 360 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 DRD3P35462 400 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 P2RY2P41231 377 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 GARSP41250 739 aaKnown RBP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 GTF2A1P52655 376 aaPredicted RBP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 RWDD2BP57060 319 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 GEMIN4P57678 1058 aaKnown RBP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 MAXP61244 160 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 CLCQ05315 142 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 IL10RBQ08334 325 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 ZBTB17Q13105 803 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 ELAVL3Q14576 367 aaKnown RBP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 ZNF235Q14590 738 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 NUMA1Q14980 2115 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 CYTH1Q15438 398 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 CST6Q15828 149 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 LPAL2Q16609 132 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 ZNF528Q3MIS6 628 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 SEL1L2Q5TEA6 688 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 DPY19L3Q6ZPD9 716 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 SLCO4C1Q6ZQN7 724 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 PRR23BQ6ZRT6 265 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 PDZD3Q86UT5 571 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 FAM124AQ86V42 546 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 LONP2Q86WA8 852 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 TMPRSS6Q8IU80 811 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 WFDC8Q8IUA0 241 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 RYBPQ8N488 228 aaPredicted RBP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 AADATQ8N5Z0 425 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 ZBTB44Q8NCP5 570 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 TRIM58Q8NG06 486 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 OR2A12Q8NGT7 310 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 PIP4K2CQ8TBX8 421 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 PRCCQ92733 491 aaPredicted RBP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 NELL1Q92832 810 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 ATOH1Q92858 354 aaPredicted RBP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 ARRDC3Q96B67 414 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 ZNF669Q96BR6 464 aaPredicted RBP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 HDAC11Q96DB2 347 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 SIPA1Q96FS4 1042 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 NSMCE3Q96MG7 304 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 GDAP1L1Q96MZ0 367 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 OLFM3Q96PB7 478 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 LGMNQ99538 433 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 CINPQ9BW66 212 aaPredicted RBP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 MAK16Q9BXY0 300 aaKnown RBP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 CEP41Q9BYV8 373 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 RSPH9Q9H1X1 276 aaPredicted RBP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 PABPC3Q9H361 631 aaKnown RBP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 FBRSQ9HAH7 460 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 SEPT10Q9P0V9 454 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 USP36Q9P275 1121 aaKnown RBP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 EBF1Q9UH73 591 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 SUN2Q9UH99 717 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 EVLQ9UI08 416 aaPredicted RBP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 MBD1Q9UIS9 605 aaPredicted RBP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 SMG5Q9UPR3 1016 aaKnown RBP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.54□□□□□ -1.36
SSBP1-205ENST00000465582 TTLL3Q9Y4R7 772 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 PCDHGA2Q9Y5H1 932 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 CACNA1HO95180 2353 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 CEP192Q8TEP8 1941 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 DCHS1Q96JQ0 3298 aa6.54□□□□□ -1.36
SSBP1-205ENST00000465582 PLXNA2O75051 1894 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 ATXN2Q99700 1313 aaKnown RBP6.53□□□□□ -1.36
SSBP1-205ENST00000465582 THADAQ6YHU6 1953 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 SPAG17Q6Q759 2223 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 ZFHX4Q86UP3 3567 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 TCRBV7S2A1N4TA0A589 114 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 C1QTNF3-AMACRE9PGA6 284 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 F5H423 210 aaPredicted RBP6.53□□□□□ -1.36
SSBP1-205ENST00000465582 APOC4-APOC2K7ER74 178 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 KCNK1O00180 336 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 KRIT1O00522 736 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 KCNK3O14649 394 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 ALOX15BO15296 676 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 RNASEH1O60930 286 aaKnown RBP6.53□□□□□ -1.36
SSBP1-205ENST00000465582 LEFTY1O75610 366 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 APOC2P02655 101 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 TUBB4AP04350 444 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 HLA-DQB2P05538 268 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 UGT2B4P06133 528 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 ACADMP11310 421 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 ZFXP17010 805 aaPredicted RBP6.53□□□□□ -1.36
SSBP1-205ENST00000465582 EPHA1P21709 976 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 TGM2P21980 687 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 CASQ1P31415 396 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 CHRNA3P32297 505 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 MMP13P45452 471 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 RECQLP46063 649 aaPredicted RBP6.53□□□□□ -1.36
SSBP1-205ENST00000465582 TPMTP51580 245 aa6.53□□□□□ -1.36
SSBP1-205ENST00000465582 SNRPD1P62314 119 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms