RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 UGT2B4P06133 528 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 DCNP07585 359 aaKnown RBP17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 CHN1P15882 459 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 TPSB2P20231 275 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 ADRA1AP35348 466 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 RPS9P46781 194 aaKnown RBP17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 COPAP53621 1224 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 OLIG2Q13516 323 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 GRM3Q14832 879 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 TPSAB1Q15661 275 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 CRY1Q16526 586 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 PCSK7Q16549 785 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 MSS51Q4VC12 460 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 CWF19L1Q69YN2 538 aaKnown RBP17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 GDPD4Q6W3E5 623 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 SYT13Q7L8C5 426 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 TMIEQ8NEW7 156 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 LRRC39Q96DD0 335 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 ZNF641Q96N77 438 aaPredicted RBP17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 TDRD1Q9BXT4 1180 aaKnown RBP17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 MKRN2Q9H000 416 aaKnown RBP17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 RSPH9Q9H1X1 276 aaPredicted RBP17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 CHRDQ9H2X0 955 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 SUV39H2Q9H5I1 410 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 VPS37BQ9H9H4 285 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 SENP1Q9P0U3 644 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 TMEM221A6NGB7 291 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 ERI2A8K979 691 aaKnown RBP17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 M0R296 226 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 NDUFAB1O14561 156 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 PI15O43692 258 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 SOCS5O75159 536 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 SUN1O94901 812 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 PRNPP04156 253 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 PDHA1P08559 390 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 SERPINA4P29622 427 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 GPX6P59796 221 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 CDK18Q07002 472 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 KLHL38Q2WGJ6 581 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 RANBP10Q6VN20 620 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 MMAAQ8IVH4 418 aaKnown RBP17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 OR2T3Q8NH03 318 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 KLHL32Q96NJ5 620 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 TRIB3Q96RU7 358 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 SELENOSQ9BQE4 189 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 ACSS3Q9H6R3 686 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 LRRC40Q9H9A6 602 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 EIF2B3Q9NR50 452 aaKnown RBP17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 CHKBQ9Y259 395 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 TEX264Q9Y6I9 313 aa17.03■□□□□ 0.32
EXOSC3-203ENST00000465229 CKAP5Q14008 2032 aa17.02■□□□□ 0.32
EXOSC3-203ENST00000465229 LOC285095A0A1B0GVY8 99 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 FZD6O60353 706 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 USP12O75317 370 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 IL1BP01584 269 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 EPOP01588 193 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 GCAP28676 217 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 GRIA1P42261 906 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 CDK16Q00536 496 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 SATB1Q01826 763 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 DSG4Q86SJ6 1040 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 SPATS2Q86XZ4 545 aaKnown RBP17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 PALM2Q8IXS6 379 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 FBXO36Q8NEA4 188 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 PIP4K2CQ8TBX8 421 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 PDCD6IPQ8WUM4 868 aaKnown RBP17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 ECHDC3Q96DC8 303 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 FEM1CQ96JP0 617 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 CCT8L2Q96SF2 557 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 APOL2Q9BQE5 337 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 FICDQ9BVA6 458 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 OSBPL1AQ9BXW6 950 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 FBRSQ9HAH7 460 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 INTS9Q9NV88 658 aaKnown RBP17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 RABGEF1Q9UJ41 708 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 ARIH1Q9Y4X5 557 aaPredicted RBP17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 PCDHB9Q9Y5E1 797 aa17.02■□□□□ 0.31
EXOSC3-203ENST00000465229 PGLSO95336 258 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 GSTA2P09210 222 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 METAP1P53582 386 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 SLC18A1P54219 525 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 RPS14P62263 151 aaKnown RBP17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 POM121L1PQ3SYA9 428 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 BBS9Q3SYG4 887 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 ZNF805Q5CZA5 627 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 C3orf62Q6ZUJ4 267 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 ZSWIM9Q86XI8 627 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 TMPRSS6Q8IU80 811 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 ANKMY2Q8IV38 441 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 SPEM1Q8N4L4 309 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 MDM1Q8TC05 714 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 SPOCK2Q92563 424 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 IFT43Q96FT9 208 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 TBL1YQ9BQ87 522 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 WDR83Q9BRX9 315 aaKnown RBP17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 FSD1LQ9BXM9 530 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 PPANQ9NQ55 473 aaKnown RBP17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 DLGAP2Q9P1A6 1054 aa17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 PSMC3IPQ9P2W1 217 aaPredicted RBP17.01■□□□□ 0.31
EXOSC3-203ENST00000465229 CTNNAL1Q9UBT7 734 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms