RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 DNAJC16Q9Y2G8 782 aa21.83■■□□□ 1.09
PDLIM2-216ENST00000464275 DOCK6Q96HP0 2047 aa21.83■■□□□ 1.09
PDLIM2-216ENST00000464275 TMEM114B3SHH9 223 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 TRIM13O60858 407 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 RPP40O75818 363 aaKnown RBP21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 KLHL2O95198 593 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 CRTAMO95727 393 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 MZF1P28698 734 aaPredicted RBP21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 AQP5P55064 265 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 INO80DQ53TQ3 878 aaPredicted RBP21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 FSCBQ5H9T9 825 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 ZYG11AQ6WRX3 759 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 HTR3DQ70Z44 454 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 TSPAN17Q96FV3 270 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 EXOC2Q96KP1 924 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 TBATAQ96M53 351 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 NSMCE3Q96MG7 304 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 GCNAQ96QF7 691 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 FEM1AQ9BSK4 669 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 TDRD1Q9BXT4 1180 aaKnown RBP21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 FAM96AQ9H5X1 160 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 MARCOQ9UEW3 520 aaPredicted RBP21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 LRRC42Q9Y546 428 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 ARL5AQ9Y689 179 aa21.83■■□□□ 1.08
PDLIM2-216ENST00000464275 TRAV19A0A0A6YYK7 116 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 SCAMP3O14828 347 aaKnown RBP21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 AURKAO14965 403 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 SNAP91O60641 907 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 TMCC1O94876 653 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 CD160O95971 181 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 CKMP06732 381 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 PFKLP17858 780 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 KPNA2P52292 529 aaKnown RBP21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 FPGSQ05932 587 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 ZNF789Q5FWF6 425 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 LRRC8EQ6NSJ5 796 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 CPXM2Q8N436 756 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 GPR150Q8NGU9 434 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 DNAJC1Q96KC8 554 aaKnown RBP21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 SORT1Q99523 831 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 OXSMQ9NWU1 459 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 SH3BP1Q9Y3L3 701 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 OR51B4Q9Y5P0 310 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 NUMBLQ9Y6R0 609 aa21.82■■□□□ 1.08
PDLIM2-216ENST00000464275 C2orf71A6NGG8 1288 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 GYG2O15488 501 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 GLP2RO95838 553 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 ESRRAP11474 423 aaPredicted RBP21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 GCKP35557 465 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 CDH18Q13634 790 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 RBM20Q5T481 1227 aaKnown RBP21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 TMEM151AQ8N4L1 468 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 TEX9Q8N6V9 391 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 RMDN1Q96DB5 314 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 ZNF570Q96NI8 536 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 CADM1Q9BY67 442 aaKnown RBP21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 STN1Q9H668 368 aaKnown RBP21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 DENND2DQ9H6A0 471 aaPredicted RBP21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 ARL8BQ9NVJ2 186 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 PRKAG2Q9UGJ0 569 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 VPS28Q9UK41 221 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 SORCS3Q9UPU3 1222 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 IRAK3Q9Y616 596 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 CCL22O00626 93 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 GSC2O15499 205 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 KIF1CO43896 1103 aaKnown RBP21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 S1PR4O95977 384 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 GOT2P00505 430 aaKnown RBP21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 PGGT1BP53609 377 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 ZNF460Q14592 562 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 HSF5Q4G112 596 aaPredicted RBP21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 SP7Q8TDD2 431 aaPredicted RBP21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 NXNL1Q96CM4 212 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 ALG14Q96F25 216 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 GPR78Q96P69 363 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 MIPEPQ99797 713 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 CFAP97Q9P2B7 532 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 CPSF2Q9P2I0 782 aaKnown RBP21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 STOML1Q9UBI4 398 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 LHX3Q9UBR4 397 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 LZTS1Q9Y250 596 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 RAI2Q9Y5P3 530 aa21.81■■□□□ 1.08
PDLIM2-216ENST00000464275 FCHO1O14526 889 aa21.8■■□□□ 1.08
PDLIM2-216ENST00000464275 SBK3P0C264 359 aa21.8■■□□□ 1.08
PDLIM2-216ENST00000464275 CSKP41240 450 aa21.8■■□□□ 1.08
PDLIM2-216ENST00000464275 LINGO4Q6UY18 593 aa21.8■■□□□ 1.08
PDLIM2-216ENST00000464275 RNF135Q8IUD6 432 aa21.8■■□□□ 1.08
PDLIM2-216ENST00000464275 FSTL5Q8N475 847 aaPredicted RBP21.8■■□□□ 1.08
PDLIM2-216ENST00000464275 DCAF4L2Q8NA75 395 aa21.8■■□□□ 1.08
PDLIM2-216ENST00000464275 BADQ92934 168 aa21.8■■□□□ 1.08
PDLIM2-216ENST00000464275 MCUR1Q96AQ8 359 aa21.8■■□□□ 1.08
PDLIM2-216ENST00000464275 TCF25Q9BQ70 676 aa21.8■■□□□ 1.08
PDLIM2-216ENST00000464275 NLE1Q9NVX2 485 aaPredicted RBP21.8■■□□□ 1.08
PDLIM2-216ENST00000464275 MARCH4Q9P2E8 410 aaPredicted RBP21.8■■□□□ 1.08
PDLIM2-216ENST00000464275 CCDC162PA2VCL2 907 aa21.79■■□□□ 1.08
PDLIM2-216ENST00000464275 OR51F1A6NGY5 319 aa21.79■■□□□ 1.08
PDLIM2-216ENST00000464275 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.79■■□□□ 1.08
PDLIM2-216ENST00000464275 TARM1B6A8C7 271 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms